RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
STRADB-202ENST00000392249 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
STRADB-202ENST00000392249 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
STRADB-202ENST00000392249 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
STRADB-202ENST00000392249 MT1GP13640 62 aa6.19□□□□□ -1.42
STRADB-202ENST00000392249 MT1MQ8N339 61 aa6.18□□□□□ -1.42
STRADB-202ENST00000392249 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
STRADB-202ENST00000392249 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
STRADB-202ENST00000392249 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
STRADB-202ENST00000392249 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
STRADB-202ENST00000392249 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
STRADB-202ENST00000392249 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
STRADB-202ENST00000392249 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
STRADB-202ENST00000392249 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.46
STRADB-202ENST00000392249 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
STRADB-202ENST00000392249 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
STRADB-202ENST00000392249 INE1O15225 51 aa5.87□□□□□ -1.47
STRADB-202ENST00000392249 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
STRADB-202ENST00000392249 SPRR2EP22531 72 aa5.77□□□□□ -1.49
STRADB-202ENST00000392249 SPRR2BP35325 72 aa5.77□□□□□ -1.49
STRADB-202ENST00000392249 SPRR2AP35326 72 aa5.77□□□□□ -1.49
STRADB-202ENST00000392249 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
STRADB-202ENST00000392249 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
STRADB-202ENST00000392249 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
STRADB-202ENST00000392249 SPRR2DP22532 72 aa5.54□□□□□ -1.52
STRADB-202ENST00000392249 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
STRADB-202ENST00000392249 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
STRADB-202ENST00000392249 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
STRADB-202ENST00000392249 MT1AP04731 61 aa5.5□□□□□ -1.53
STRADB-202ENST00000392249 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
STRADB-202ENST00000392249 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
STRADB-202ENST00000392249 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
STRADB-202ENST00000392249 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
STRADB-202ENST00000392249 KRTAP9-7A8MTY7 169 aa5.23□□□□□ -1.57
STRADB-202ENST00000392249 NEBP20929 6669 aa5.21□□□□□ -1.58
STRADB-202ENST00000392249 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
STRADB-202ENST00000392249 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
STRADB-202ENST00000392249 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
STRADB-202ENST00000392249 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
STRADB-202ENST00000392249 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
STRADB-202ENST00000392249 MT3P25713 68 aa4.95□□□□□ -1.62
STRADB-202ENST00000392249 MT4P47944 62 aa4.87□□□□□ -1.63
STRADB-202ENST00000392249 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
STRADB-202ENST00000392249 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
STRADB-202ENST00000392249 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
STRADB-202ENST00000392249 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
STRADB-202ENST00000392249 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
STRADB-202ENST00000392249 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
STRADB-202ENST00000392249 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
STRADB-202ENST00000392249 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
STRADB-202ENST00000392249 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
STRADB-202ENST00000392249 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
STRADB-202ENST00000392249 PRM1P04553 51 aa4.58□□□□□ -1.68
STRADB-202ENST00000392249 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
STRADB-202ENST00000392249 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
STRADB-202ENST00000392249 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
STRADB-202ENST00000392249 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
STRADB-202ENST00000392249 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
STRADB-202ENST00000392249 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
STRADB-202ENST00000392249 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
STRADB-202ENST00000392249 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
STRADB-202ENST00000392249 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
STRADB-202ENST00000392249 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
STRADB-202ENST00000392249 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
STRADB-202ENST00000392249 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
STRADB-202ENST00000392249 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
STRADB-202ENST00000392249 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.84
STRADB-202ENST00000392249 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
STRADB-202ENST00000392249 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
STRADB-202ENST00000392249 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
STRADB-202ENST00000392249 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
STRADB-202ENST00000392249 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
STRADB-202ENST00000392249 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
STRADB-202ENST00000392249 LCE1FQ5T754 118 aa2.9□□□□□ -1.94
STRADB-202ENST00000392249 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
STRADB-202ENST00000392249 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
STRADB-202ENST00000392249 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 88.5 ms