RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
SMARCAL1-203ENST00000392128 MT1LQ93083 61 aa4.06□□□□□ -1.76
SMARCAL1-203ENST00000392128 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
SMARCAL1-203ENST00000392128 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
SMARCAL1-203ENST00000392128 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
SMARCAL1-203ENST00000392128 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
SMARCAL1-203ENST00000392128 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
SMARCAL1-203ENST00000392128 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
SMARCAL1-203ENST00000392128 MT1GP13640 62 aa3.93□□□□□ -1.78
SMARCAL1-203ENST00000392128 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
SMARCAL1-203ENST00000392128 MT1MQ8N339 61 aa3.89□□□□□ -1.79
SMARCAL1-203ENST00000392128 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
SMARCAL1-203ENST00000392128 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
SMARCAL1-203ENST00000392128 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
SMARCAL1-203ENST00000392128 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
SMARCAL1-203ENST00000392128 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
SMARCAL1-203ENST00000392128 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
SMARCAL1-203ENST00000392128 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
SMARCAL1-203ENST00000392128 SPRR2EP22531 72 aa3.75□□□□□ -1.81
SMARCAL1-203ENST00000392128 SPRR2BP35325 72 aa3.75□□□□□ -1.81
SMARCAL1-203ENST00000392128 SPRR2AP35326 72 aa3.75□□□□□ -1.81
SMARCAL1-203ENST00000392128 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
SMARCAL1-203ENST00000392128 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
SMARCAL1-203ENST00000392128 SPRR2DP22532 72 aa3.62□□□□□ -1.83
SMARCAL1-203ENST00000392128 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
SMARCAL1-203ENST00000392128 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
SMARCAL1-203ENST00000392128 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
SMARCAL1-203ENST00000392128 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
SMARCAL1-203ENST00000392128 NEBP20929 6669 aa3.5□□□□□ -1.85
SMARCAL1-203ENST00000392128 LCE3BQ5TA77 95 aa3.46□□□□□ -1.85
SMARCAL1-203ENST00000392128 MT1AP04731 61 aa3.45□□□□□ -1.86
SMARCAL1-203ENST00000392128 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
SMARCAL1-203ENST00000392128 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
SMARCAL1-203ENST00000392128 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
SMARCAL1-203ENST00000392128 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
SMARCAL1-203ENST00000392128 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.89
SMARCAL1-203ENST00000392128 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.89
SMARCAL1-203ENST00000392128 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.89
SMARCAL1-203ENST00000392128 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
SMARCAL1-203ENST00000392128 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
SMARCAL1-203ENST00000392128 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
SMARCAL1-203ENST00000392128 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
SMARCAL1-203ENST00000392128 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
SMARCAL1-203ENST00000392128 MT4P47944 62 aa3.13□□□□□ -1.91
SMARCAL1-203ENST00000392128 MT3P25713 68 aa3.12□□□□□ -1.91
SMARCAL1-203ENST00000392128 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
SMARCAL1-203ENST00000392128 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
SMARCAL1-203ENST00000392128 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
SMARCAL1-203ENST00000392128 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
SMARCAL1-203ENST00000392128 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SMARCAL1-203ENST00000392128 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
SMARCAL1-203ENST00000392128 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
SMARCAL1-203ENST00000392128 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SMARCAL1-203ENST00000392128 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
SMARCAL1-203ENST00000392128 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
SMARCAL1-203ENST00000392128 PRM1P04553 51 aa2.79□□□□□ -1.96
SMARCAL1-203ENST00000392128 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
SMARCAL1-203ENST00000392128 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
SMARCAL1-203ENST00000392128 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
SMARCAL1-203ENST00000392128 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
SMARCAL1-203ENST00000392128 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
SMARCAL1-203ENST00000392128 KRTAP5-8O75690 187 aa2.55□□□□□ -2
SMARCAL1-203ENST00000392128 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
SMARCAL1-203ENST00000392128 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
SMARCAL1-203ENST00000392128 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
SMARCAL1-203ENST00000392128 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
SMARCAL1-203ENST00000392128 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
SMARCAL1-203ENST00000392128 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
SMARCAL1-203ENST00000392128 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
SMARCAL1-203ENST00000392128 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
SMARCAL1-203ENST00000392128 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
SMARCAL1-203ENST00000392128 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
SMARCAL1-203ENST00000392128 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
SMARCAL1-203ENST00000392128 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
SMARCAL1-203ENST00000392128 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SMARCAL1-203ENST00000392128 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SMARCAL1-203ENST00000392128 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
SMARCAL1-203ENST00000392128 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 84.3 ms