RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 SPRR2EP22531 72 aa4.36□□□□□ -1.71
ERCC2-204ENST00000391945 SPRR2BP35325 72 aa4.36□□□□□ -1.71
ERCC2-204ENST00000391945 SPRR2AP35326 72 aa4.36□□□□□ -1.71
ERCC2-204ENST00000391945 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.72
ERCC2-204ENST00000391945 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
ERCC2-204ENST00000391945 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
ERCC2-204ENST00000391945 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
ERCC2-204ENST00000391945 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
ERCC2-204ENST00000391945 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
ERCC2-204ENST00000391945 MT1MQ8N339 61 aa4.22□□□□□ -1.73
ERCC2-204ENST00000391945 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
ERCC2-204ENST00000391945 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
ERCC2-204ENST00000391945 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
ERCC2-204ENST00000391945 SPRR2DP22532 72 aa4.18□□□□□ -1.74
ERCC2-204ENST00000391945 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
ERCC2-204ENST00000391945 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
ERCC2-204ENST00000391945 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
ERCC2-204ENST00000391945 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
ERCC2-204ENST00000391945 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
ERCC2-204ENST00000391945 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
ERCC2-204ENST00000391945 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
ERCC2-204ENST00000391945 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.95□□□□□ -1.78
ERCC2-204ENST00000391945 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
ERCC2-204ENST00000391945 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.78
ERCC2-204ENST00000391945 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.78
ERCC2-204ENST00000391945 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.78
ERCC2-204ENST00000391945 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
ERCC2-204ENST00000391945 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
ERCC2-204ENST00000391945 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
ERCC2-204ENST00000391945 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
ERCC2-204ENST00000391945 MT4P47944 62 aa3.78□□□□□ -1.8
ERCC2-204ENST00000391945 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
ERCC2-204ENST00000391945 MT1AP04731 61 aa3.76□□□□□ -1.81
ERCC2-204ENST00000391945 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
ERCC2-204ENST00000391945 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
ERCC2-204ENST00000391945 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
ERCC2-204ENST00000391945 MT3P25713 68 aa3.64□□□□□ -1.83
ERCC2-204ENST00000391945 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
ERCC2-204ENST00000391945 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
ERCC2-204ENST00000391945 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
ERCC2-204ENST00000391945 PRM1P04553 51 aa3.49□□□□□ -1.85
ERCC2-204ENST00000391945 NEBP20929 6669 aa3.46□□□□□ -1.86
ERCC2-204ENST00000391945 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
ERCC2-204ENST00000391945 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
ERCC2-204ENST00000391945 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
ERCC2-204ENST00000391945 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
ERCC2-204ENST00000391945 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
ERCC2-204ENST00000391945 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
ERCC2-204ENST00000391945 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
ERCC2-204ENST00000391945 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
ERCC2-204ENST00000391945 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
ERCC2-204ENST00000391945 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
ERCC2-204ENST00000391945 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
ERCC2-204ENST00000391945 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
ERCC2-204ENST00000391945 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
ERCC2-204ENST00000391945 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
ERCC2-204ENST00000391945 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
ERCC2-204ENST00000391945 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
ERCC2-204ENST00000391945 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
ERCC2-204ENST00000391945 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
ERCC2-204ENST00000391945 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
ERCC2-204ENST00000391945 LCE1CQ5T751 118 aa2.57□□□□□ -2
ERCC2-204ENST00000391945 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
ERCC2-204ENST00000391945 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
ERCC2-204ENST00000391945 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
ERCC2-204ENST00000391945 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
ERCC2-204ENST00000391945 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
ERCC2-204ENST00000391945 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
ERCC2-204ENST00000391945 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
ERCC2-204ENST00000391945 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
ERCC2-204ENST00000391945 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
ERCC2-204ENST00000391945 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
ERCC2-204ENST00000391945 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
ERCC2-204ENST00000391945 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
ERCC2-204ENST00000391945 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
ERCC2-204ENST00000391945 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
ERCC2-204ENST00000391945 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 129.5 ms