RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
ERCC2-203ENST00000391944 MT1GP13640 62 aa6.43□□□□□ -1.38
ERCC2-203ENST00000391944 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
ERCC2-203ENST00000391944 MT1MQ8N339 61 aa6.38□□□□□ -1.39
ERCC2-203ENST00000391944 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
ERCC2-203ENST00000391944 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
ERCC2-203ENST00000391944 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
ERCC2-203ENST00000391944 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
ERCC2-203ENST00000391944 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
ERCC2-203ENST00000391944 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
ERCC2-203ENST00000391944 KRTAP2-1Q9BYU5 128 aa6.23□□□□□ -1.41
ERCC2-203ENST00000391944 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
ERCC2-203ENST00000391944 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
ERCC2-203ENST00000391944 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
ERCC2-203ENST00000391944 INE1O15225 51 aa6.1□□□□□ -1.43
ERCC2-203ENST00000391944 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
ERCC2-203ENST00000391944 LCE1AQ5T7P2 110 aa6.05□□□□□ -1.44
ERCC2-203ENST00000391944 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
ERCC2-203ENST00000391944 DSTQ03001 7570 aaKnown RBP6.03□□□□□ -1.44
ERCC2-203ENST00000391944 SPRR2EP22531 72 aa5.93□□□□□ -1.46
ERCC2-203ENST00000391944 SPRR2BP35325 72 aa5.93□□□□□ -1.46
ERCC2-203ENST00000391944 SPRR2AP35326 72 aa5.93□□□□□ -1.46
ERCC2-203ENST00000391944 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
ERCC2-203ENST00000391944 KRTAP6-3Q3LI67 103 aa5.85□□□□□ -1.47
ERCC2-203ENST00000391944 KRTAP5-5Q701N2 237 aaPredicted RBP5.71□□□□□ -1.5
ERCC2-203ENST00000391944 MT1AP04731 61 aa5.69□□□□□ -1.5
ERCC2-203ENST00000391944 SPRR2DP22532 72 aa5.69□□□□□ -1.5
ERCC2-203ENST00000391944 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
ERCC2-203ENST00000391944 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
ERCC2-203ENST00000391944 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
ERCC2-203ENST00000391944 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
ERCC2-203ENST00000391944 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
ERCC2-203ENST00000391944 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
ERCC2-203ENST00000391944 NEBP20929 6669 aa5.39□□□□□ -1.55
ERCC2-203ENST00000391944 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
ERCC2-203ENST00000391944 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
ERCC2-203ENST00000391944 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
ERCC2-203ENST00000391944 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
ERCC2-203ENST00000391944 MT3P25713 68 aa5.14□□□□□ -1.59
ERCC2-203ENST00000391944 LCE3EQ5T5B0 92 aa5.14□□□□□ -1.59
ERCC2-203ENST00000391944 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
ERCC2-203ENST00000391944 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
ERCC2-203ENST00000391944 MT4P47944 62 aa4.96□□□□□ -1.61
ERCC2-203ENST00000391944 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
ERCC2-203ENST00000391944 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
ERCC2-203ENST00000391944 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
ERCC2-203ENST00000391944 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
ERCC2-203ENST00000391944 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
ERCC2-203ENST00000391944 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
ERCC2-203ENST00000391944 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
ERCC2-203ENST00000391944 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
ERCC2-203ENST00000391944 PRM1P04553 51 aa4.68□□□□□ -1.66
ERCC2-203ENST00000391944 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
ERCC2-203ENST00000391944 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
ERCC2-203ENST00000391944 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
ERCC2-203ENST00000391944 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
ERCC2-203ENST00000391944 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
ERCC2-203ENST00000391944 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
ERCC2-203ENST00000391944 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
ERCC2-203ENST00000391944 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
ERCC2-203ENST00000391944 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
ERCC2-203ENST00000391944 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
ERCC2-203ENST00000391944 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
ERCC2-203ENST00000391944 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
ERCC2-203ENST00000391944 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
ERCC2-203ENST00000391944 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
ERCC2-203ENST00000391944 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
ERCC2-203ENST00000391944 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
ERCC2-203ENST00000391944 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
ERCC2-203ENST00000391944 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
ERCC2-203ENST00000391944 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
ERCC2-203ENST00000391944 LCE1FQ5T754 118 aa3.15□□□□□ -1.9
ERCC2-203ENST00000391944 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
ERCC2-203ENST00000391944 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
ERCC2-203ENST00000391944 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
ERCC2-203ENST00000391944 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
ERCC2-203ENST00000391944 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 63.6 ms