RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 KRTAP2-1Q9BYU5 128 aa7.11□□□□□ -1.27
COL23A1-201ENST00000390654 KRTAP4-3Q9BYR4 195 aa7.08□□□□□ -1.28
COL23A1-201ENST00000390654 LOC100996750A0A140TA64 210 aa7.06□□□□□ -1.28
COL23A1-201ENST00000390654 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
COL23A1-201ENST00000390654 MT1GP13640 62 aa6.92□□□□□ -1.3
COL23A1-201ENST00000390654 KRTAP19-6Q3LI70 58 aa6.88□□□□□ -1.31
COL23A1-201ENST00000390654 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
COL23A1-201ENST00000390654 SYNE1Q8NF91 8797 aaKnown RBP6.73□□□□□ -1.33
COL23A1-201ENST00000390654 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
COL23A1-201ENST00000390654 MT1MQ8N339 61 aa6.68□□□□□ -1.34
COL23A1-201ENST00000390654 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
COL23A1-201ENST00000390654 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
COL23A1-201ENST00000390654 KRTAP19-3Q7Z4W3 81 aa6.65□□□□□ -1.34
COL23A1-201ENST00000390654 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
COL23A1-201ENST00000390654 KRTAP12-4P60329 112 aa6.55□□□□□ -1.36
COL23A1-201ENST00000390654 MDN1Q9NU22 5596 aa6.5□□□□□ -1.37
COL23A1-201ENST00000390654 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
COL23A1-201ENST00000390654 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
COL23A1-201ENST00000390654 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.37
COL23A1-201ENST00000390654 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
COL23A1-201ENST00000390654 KRTAP6-1Q3LI64 71 aa6.19□□□□□ -1.42
COL23A1-201ENST00000390654 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
COL23A1-201ENST00000390654 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
COL23A1-201ENST00000390654 SPRR2EP22531 72 aa6□□□□□ -1.45
COL23A1-201ENST00000390654 SPRR2BP35325 72 aa6□□□□□ -1.45
COL23A1-201ENST00000390654 SPRR2AP35326 72 aa6□□□□□ -1.45
COL23A1-201ENST00000390654 LCE3DQ9BYE3 92 aa5.99□□□□□ -1.45
COL23A1-201ENST00000390654 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
COL23A1-201ENST00000390654 MT1AP04731 61 aa5.93□□□□□ -1.46
COL23A1-201ENST00000390654 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
COL23A1-201ENST00000390654 PRM1P04553 51 aa5.83□□□□□ -1.48
COL23A1-201ENST00000390654 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
COL23A1-201ENST00000390654 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
COL23A1-201ENST00000390654 SPRR2DP22532 72 aa5.7□□□□□ -1.5
COL23A1-201ENST00000390654 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
COL23A1-201ENST00000390654 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.52
COL23A1-201ENST00000390654 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
COL23A1-201ENST00000390654 MT3P25713 68 aa5.35□□□□□ -1.55
COL23A1-201ENST00000390654 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
COL23A1-201ENST00000390654 MT4P47944 62 aa5.25□□□□□ -1.57
COL23A1-201ENST00000390654 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
COL23A1-201ENST00000390654 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.58
COL23A1-201ENST00000390654 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
COL23A1-201ENST00000390654 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
COL23A1-201ENST00000390654 NEBP20929 6669 aa5.03□□□□□ -1.6
COL23A1-201ENST00000390654 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
COL23A1-201ENST00000390654 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
COL23A1-201ENST00000390654 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
COL23A1-201ENST00000390654 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
COL23A1-201ENST00000390654 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
COL23A1-201ENST00000390654 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
COL23A1-201ENST00000390654 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
COL23A1-201ENST00000390654 MUC19Q7Z5P9 8384 aa4.64□□□□□ -1.67
COL23A1-201ENST00000390654 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
COL23A1-201ENST00000390654 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
COL23A1-201ENST00000390654 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
COL23A1-201ENST00000390654 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
COL23A1-201ENST00000390654 LCE1FQ5T754 118 aa4.4□□□□□ -1.7
COL23A1-201ENST00000390654 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
COL23A1-201ENST00000390654 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
COL23A1-201ENST00000390654 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
COL23A1-201ENST00000390654 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
COL23A1-201ENST00000390654 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
COL23A1-201ENST00000390654 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.78
COL23A1-201ENST00000390654 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
COL23A1-201ENST00000390654 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
COL23A1-201ENST00000390654 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
COL23A1-201ENST00000390654 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
COL23A1-201ENST00000390654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
COL23A1-201ENST00000390654 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
COL23A1-201ENST00000390654 KRTAP21-1Q3LI58 79 aa3.5□□□□□ -1.85
COL23A1-201ENST00000390654 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
COL23A1-201ENST00000390654 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
COL23A1-201ENST00000390654 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
COL23A1-201ENST00000390654 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
COL23A1-201ENST00000390654 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
COL23A1-201ENST00000390654 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms