RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 K7ERS5 55 aa7.84□□□□□ -1.15
IGHV3-20-201ENST00000390606 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
IGHV3-20-201ENST00000390606 PP632Q6XCG6 107 aa7.79□□□□□ -1.16
IGHV3-20-201ENST00000390606 MT1MQ8N339 61 aa7.78□□□□□ -1.16
IGHV3-20-201ENST00000390606 DSTQ03001 7570 aaKnown RBP7.77□□□□□ -1.17
IGHV3-20-201ENST00000390606 A6NED7 52 aa7.76□□□□□ -1.17
IGHV3-20-201ENST00000390606 KRTAP25-1Q3LHN0 102 aa7.76□□□□□ -1.17
IGHV3-20-201ENST00000390606 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
IGHV3-20-201ENST00000390606 KRTAP4-3Q9BYR4 195 aa7.61□□□□□ -1.19
IGHV3-20-201ENST00000390606 KRTAP4-7Q9BYR0 210 aa7.51□□□□□ -1.21
IGHV3-20-201ENST00000390606 KRTAP23-1A1A580 65 aa7.5□□□□□ -1.21
IGHV3-20-201ENST00000390606 CDC42SE1Q9NRR8 79 aa7.48□□□□□ -1.21
IGHV3-20-201ENST00000390606 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
IGHV3-20-201ENST00000390606 ROMO1P60602 79 aa7.39□□□□□ -1.23
IGHV3-20-201ENST00000390606 LCE4AQ5TA78 99 aa7.38□□□□□ -1.23
IGHV3-20-201ENST00000390606 LCE1DQ5T752 114 aa7.32□□□□□ -1.24
IGHV3-20-201ENST00000390606 KRTAP5-4Q6L8H1 288 aa7.32□□□□□ -1.24
IGHV3-20-201ENST00000390606 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
IGHV3-20-201ENST00000390606 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
IGHV3-20-201ENST00000390606 MT4P47944 62 aa7.25□□□□□ -1.25
IGHV3-20-201ENST00000390606 KRTAP5-5Q701N2 237 aaPredicted RBP7.14□□□□□ -1.27
IGHV3-20-201ENST00000390606 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
IGHV3-20-201ENST00000390606 KRTAP4-6Q9BYQ5 205 aa7.11□□□□□ -1.27
IGHV3-20-201ENST00000390606 HMCN1Q96RW7 5635 aa7.11□□□□□ -1.27
IGHV3-20-201ENST00000390606 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
IGHV3-20-201ENST00000390606 GPR98Q8WXG9 6306 aa6.97□□□□□ -1.29
IGHV3-20-201ENST00000390606 KRTAP20-2Q3LI61 65 aa6.87□□□□□ -1.31
IGHV3-20-201ENST00000390606 BRK1Q8WUW1 75 aa6.87□□□□□ -1.31
IGHV3-20-201ENST00000390606 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
IGHV3-20-201ENST00000390606 KRTAP12-4P60329 112 aa6.84□□□□□ -1.31
IGHV3-20-201ENST00000390606 AHNAK2Q8IVF2 5795 aa6.81□□□□□ -1.32
IGHV3-20-201ENST00000390606 SYNE1Q8NF91 8797 aaKnown RBP6.78□□□□□ -1.32
IGHV3-20-201ENST00000390606 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
IGHV3-20-201ENST00000390606 KRTAP5-10Q6L8G5 202 aa6.71□□□□□ -1.34
IGHV3-20-201ENST00000390606 MT1AP04731 61 aa6.7□□□□□ -1.34
IGHV3-20-201ENST00000390606 KRTAP5-3Q6L8H2 238 aa6.68□□□□□ -1.34
IGHV3-20-201ENST00000390606 KRTAP6-1Q3LI64 71 aa6.65□□□□□ -1.34
IGHV3-20-201ENST00000390606 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
IGHV3-20-201ENST00000390606 KRTAP5-2Q701N4 177 aa6.45□□□□□ -1.38
IGHV3-20-201ENST00000390606 KRTAP9-4Q9BYQ2 154 aa6.45□□□□□ -1.38
IGHV3-20-201ENST00000390606 KRTAP5-7Q6L8G8 165 aa6.41□□□□□ -1.38
IGHV3-20-201ENST00000390606 KRTAP6-2Q3LI66 62 aa6.29□□□□□ -1.4
IGHV3-20-201ENST00000390606 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
IGHV3-20-201ENST00000390606 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
IGHV3-20-201ENST00000390606 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
IGHV3-20-201ENST00000390606 MT3P25713 68 aa6.09□□□□□ -1.43
IGHV3-20-201ENST00000390606 KRTAP5-8O75690 187 aa6.02□□□□□ -1.45
IGHV3-20-201ENST00000390606 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
IGHV3-20-201ENST00000390606 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
IGHV3-20-201ENST00000390606 KRTAP5-1Q6L8H4 278 aa5.75□□□□□ -1.49
IGHV3-20-201ENST00000390606 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
IGHV3-20-201ENST00000390606 LCE1EQ5T753 118 aa5.56□□□□□ -1.52
IGHV3-20-201ENST00000390606 MUC5ACP98088 5654 aa5.56□□□□□ -1.52
IGHV3-20-201ENST00000390606 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
IGHV3-20-201ENST00000390606 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
IGHV3-20-201ENST00000390606 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
IGHV3-20-201ENST00000390606 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
IGHV3-20-201ENST00000390606 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
IGHV3-20-201ENST00000390606 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
IGHV3-20-201ENST00000390606 LCE1CQ5T751 118 aa5.16□□□□□ -1.58
IGHV3-20-201ENST00000390606 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
IGHV3-20-201ENST00000390606 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
IGHV3-20-201ENST00000390606 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
IGHV3-20-201ENST00000390606 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
IGHV3-20-201ENST00000390606 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
IGHV3-20-201ENST00000390606 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
IGHV3-20-201ENST00000390606 KRTAP21-2Q3LI59 83 aa4.39□□□□□ -1.71
IGHV3-20-201ENST00000390606 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
IGHV3-20-201ENST00000390606 PHGR1C9JFL3 82 aa4.02□□□□□ -1.77
IGHV3-20-201ENST00000390606 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
IGHV3-20-201ENST00000390606 PRM1P04553 51 aa3.8□□□□□ -1.8
IGHV3-20-201ENST00000390606 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
IGHV3-20-201ENST00000390606 INE1O15225 51 aa3.47□□□□□ -1.85
IGHV3-20-201ENST00000390606 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
IGHV3-20-201ENST00000390606 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
IGHV3-20-201ENST00000390606 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
IGHV3-20-201ENST00000390606 H3BS24 57 aa2.51□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 70 ms