RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 HMCN2Q8NDA2 5059 aa0.26□□□□□ -2.37
TRAV40-201ENST00000390467 MYO9AB2RTY4 2548 aa0.26□□□□□ -2.37
TRAV40-201ENST00000390467 ASPMQ8IZT6 3477 aa0.25□□□□□ -2.37
TRAV40-201ENST00000390467 CFAP47Q6ZTR5 3102 aa0.25□□□□□ -2.37
TRAV40-201ENST00000390467 STARD9Q9P2P6 4700 aa0.25□□□□□ -2.37
TRAV40-201ENST00000390467 LRP2P98164 4655 aa0.25□□□□□ -2.37
TRAV40-201ENST00000390467 DEFB108BQ8NET1 73 aa0.25□□□□□ -2.37
TRAV40-201ENST00000390467 UTRNP46939 3433 aa0.25□□□□□ -2.37
TRAV40-201ENST00000390467 HERC1Q15751 4861 aa0.24□□□□□ -2.37
TRAV40-201ENST00000390467 MYO15AQ9UKN7 3530 aa0.24□□□□□ -2.37
TRAV40-201ENST00000390467 A0A096LPF7 62 aa0.24□□□□□ -2.37
TRAV40-201ENST00000390467 SPRR2EP22531 72 aa0.24□□□□□ -2.37
TRAV40-201ENST00000390467 DEFB133Q30KQ1 61 aa0.24□□□□□ -2.37
TRAV40-201ENST00000390467 SPRR2FQ96RM1 72 aa0.24□□□□□ -2.37
TRAV40-201ENST00000390467 RPS29P62273 56 aaKnown RBP0.23□□□□□ -2.37
TRAV40-201ENST00000390467 LINC01556Q5JQF7 62 aa0.23□□□□□ -2.37
TRAV40-201ENST00000390467 DNHD1Q96M86 4753 aa0.23□□□□□ -2.37
TRAV40-201ENST00000390467 LOC400499M0QZD8 3231 aa0.23□□□□□ -2.37
TRAV40-201ENST00000390467 EYSQ5T1H1 3165 aa0.22□□□□□ -2.37
TRAV40-201ENST00000390467 PCNTO95613 3336 aa0.22□□□□□ -2.37
TRAV40-201ENST00000390467 VPS13AQ96RL7 3174 aa0.21□□□□□ -2.38
TRAV40-201ENST00000390467 Q9Y3F1 56 aa0.21□□□□□ -2.38
TRAV40-201ENST00000390467 SPEGQ15772 3267 aa0.21□□□□□ -2.38
TRAV40-201ENST00000390467 EP400Q96L91 3159 aa0.2□□□□□ -2.38
TRAV40-201ENST00000390467 MT1EP04732 61 aa0.2□□□□□ -2.38
TRAV40-201ENST00000390467 UNC80Q8N2C7 3258 aa0.19□□□□□ -2.38
TRAV40-201ENST00000390467 MT1HP80294 61 aa0.19□□□□□ -2.38
TRAV40-201ENST00000390467 SSPOA2VEC9 5147 aa0.19□□□□□ -2.38
TRAV40-201ENST00000390467 VCANP13611 3396 aa0.19□□□□□ -2.38
TRAV40-201ENST00000390467 GPR98Q8WXG9 6306 aa0.18□□□□□ -2.38
TRAV40-201ENST00000390467 WDFY3Q8IZQ1 3526 aa0.18□□□□□ -2.38
TRAV40-201ENST00000390467 CD52P31358 61 aa0.18□□□□□ -2.38
TRAV40-201ENST00000390467 BRCA2P51587 3418 aa0.18□□□□□ -2.38
TRAV40-201ENST00000390467 USH2AO75445 5202 aa0.17□□□□□ -2.38
TRAV40-201ENST00000390467 GOLGB1Q14789 3259 aaKnown RBP0.17□□□□□ -2.38
TRAV40-201ENST00000390467 KMT2CQ8NEZ4 4911 aaKnown RBP0.17□□□□□ -2.38
TRAV40-201ENST00000390467 DNAH14Q0VDD8 3507 aa0.17□□□□□ -2.38
TRAV40-201ENST00000390467 MT1LQ93083 61 aa0.17□□□□□ -2.38
TRAV40-201ENST00000390467 HERC2O95714 4834 aa0.16□□□□□ -2.38
TRAV40-201ENST00000390467 PCLOQ9Y6V0 5065 aa0.16□□□□□ -2.38
TRAV40-201ENST00000390467 UBR4Q5T4S7 5183 aa0.16□□□□□ -2.38
TRAV40-201ENST00000390467 MACF1Q9UPN3 7388 aaKnown RBP0.16□□□□□ -2.38
TRAV40-201ENST00000390467 RYR1P21817 5038 aa0.16□□□□□ -2.38
TRAV40-201ENST00000390467 CENPFP49454 3210 aa0.15□□□□□ -2.39
TRAV40-201ENST00000390467 DEFB4AO15263 64 aa0.15□□□□□ -2.39
TRAV40-201ENST00000390467 MT1XP80297 61 aa0.14□□□□□ -2.39
TRAV40-201ENST00000390467 BIRC6Q9NR09 4857 aa0.14□□□□□ -2.39
TRAV40-201ENST00000390467 HTN3P15516 51 aa0.13□□□□□ -2.39
TRAV40-201ENST00000390467 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
TRAV40-201ENST00000390467 MUC2Q02817 5179 aa0.12□□□□□ -2.39
TRAV40-201ENST00000390467 DSTQ03001 7570 aaKnown RBP0.12□□□□□ -2.39
TRAV40-201ENST00000390467 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
TRAV40-201ENST00000390467 FSIP2Q5CZC0 6907 aa0.11□□□□□ -2.39
TRAV40-201ENST00000390467 SYNE2Q8WXH0 6885 aaKnown RBP0.11□□□□□ -2.39
TRAV40-201ENST00000390467 RYR3Q15413 4870 aa0.09□□□□□ -2.39
TRAV40-201ENST00000390467 MT1GP13640 62 aa0.09□□□□□ -2.4
TRAV40-201ENST00000390467 KRTAP6-1Q3LI64 71 aa0.09□□□□□ -2.4
TRAV40-201ENST00000390467 KRTAP19-7Q3SYF9 63 aa0.09□□□□□ -2.4
TRAV40-201ENST00000390467 HYDINQ4G0P3 5121 aa0.09□□□□□ -2.4
TRAV40-201ENST00000390467 KRTAP19-8Q3LI54 63 aa0.08□□□□□ -2.4
TRAV40-201ENST00000390467 RNF213Q63HN8 5207 aa0.08□□□□□ -2.4
TRAV40-201ENST00000390467 EPPK1P58107 5090 aaKnown RBP0.08□□□□□ -2.4
TRAV40-201ENST00000390467 CDH23Q9H251 3354 aa0.07□□□□□ -2.4
TRAV40-201ENST00000390467 MT1MQ8N339 61 aa0.07□□□□□ -2.4
TRAV40-201ENST00000390467 MT2AP02795 61 aa0.06□□□□□ -2.4
TRAV40-201ENST00000390467 NEBP20929 6669 aa0.05□□□□□ -2.4
TRAV40-201ENST00000390467 KRTAP19-2Q3LHN2 52 aa0.04□□□□□ -2.4
TRAV40-201ENST00000390467 KIAA1109Q2LD37 5005 aa0.04□□□□□ -2.4
TRAV40-201ENST00000390467 MT1BP07438 61 aa0.03□□□□□ -2.4
TRAV40-201ENST00000390467 MT1HL1P0DM35 61 aa0.03□□□□□ -2.4
TRAV40-201ENST00000390467 RYR2Q92736 4967 aa0.02□□□□□ -2.41
TRAV40-201ENST00000390467 MT1FP04733 61 aa-0.01□□□□□ -2.41
TRAV40-201ENST00000390467 MT4P47944 62 aa-0.01□□□□□ -2.41
TRAV40-201ENST00000390467 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
TRAV40-201ENST00000390467 ABCA13Q86UQ4 5058 aa-0.03□□□□□ -2.41
TRAV40-201ENST00000390467 KRTAP20-1Q3LI63 56 aa-0.07□□□□□ -2.42
TRAV40-201ENST00000390467 KRTAP19-6Q3LI70 58 aa-0.2□□□□□ -2.44
Retrieved 77 of 20,778 RNA–protein pairs in 179 ms