RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
TRAV3-201ENST00000390425 PCP4P48539 62 aa3.82□□□□□ -1.8
TRAV3-201ENST00000390425 A8MU10 97 aa3.79□□□□□ -1.8
TRAV3-201ENST00000390425 H7BZZ5 65 aa3.76□□□□□ -1.81
TRAV3-201ENST00000390425 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
TRAV3-201ENST00000390425 SMIM26A0A096LP01 95 aa3.74□□□□□ -1.81
TRAV3-201ENST00000390425 TNP1P09430 55 aa3.74□□□□□ -1.81
TRAV3-201ENST00000390425 COX7CP15954 63 aa3.74□□□□□ -1.81
TRAV3-201ENST00000390425 A0A1B0GU69 56 aa3.72□□□□□ -1.81
TRAV3-201ENST00000390425 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
TRAV3-201ENST00000390425 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
TRAV3-201ENST00000390425 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
TRAV3-201ENST00000390425 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
TRAV3-201ENST00000390425 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
TRAV3-201ENST00000390425 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
TRAV3-201ENST00000390425 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
TRAV3-201ENST00000390425 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
TRAV3-201ENST00000390425 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
TRAV3-201ENST00000390425 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
TRAV3-201ENST00000390425 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
TRAV3-201ENST00000390425 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
TRAV3-201ENST00000390425 ANAPC13Q9BS18 74 aa3.49□□□□□ -1.85
TRAV3-201ENST00000390425 CCDC179H3BU77 68 aa3.47□□□□□ -1.85
TRAV3-201ENST00000390425 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
TRAV3-201ENST00000390425 ATP5EP56381 51 aaPredicted RBP3.44□□□□□ -1.86
TRAV3-201ENST00000390425 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
TRAV3-201ENST00000390425 UQCR11O14957 56 aa3.42□□□□□ -1.86
TRAV3-201ENST00000390425 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
TRAV3-201ENST00000390425 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
TRAV3-201ENST00000390425 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
TRAV3-201ENST00000390425 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
TRAV3-201ENST00000390425 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
TRAV3-201ENST00000390425 MIR22HGQ0VDD5 57 aa3.34□□□□□ -1.87
TRAV3-201ENST00000390425 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
TRAV3-201ENST00000390425 MT1AP04731 61 aa3.33□□□□□ -1.88
TRAV3-201ENST00000390425 TMEM258P61165 79 aa3.29□□□□□ -1.88
TRAV3-201ENST00000390425 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
TRAV3-201ENST00000390425 K7ERS5 55 aa3.25□□□□□ -1.89
TRAV3-201ENST00000390425 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
TRAV3-201ENST00000390425 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
TRAV3-201ENST00000390425 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
TRAV3-201ENST00000390425 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
TRAV3-201ENST00000390425 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
TRAV3-201ENST00000390425 PSPHP1O15172 72 aa3.19□□□□□ -1.9
TRAV3-201ENST00000390425 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
TRAV3-201ENST00000390425 Q1T7F1 81 aa3.12□□□□□ -1.91
TRAV3-201ENST00000390425 V9GYY9 64 aa3.11□□□□□ -1.91
TRAV3-201ENST00000390425 CDC42SE1Q9NRR8 79 aa3.1□□□□□ -1.91
TRAV3-201ENST00000390425 ROMO1P60602 79 aa3.05□□□□□ -1.92
TRAV3-201ENST00000390425 RPS28P62857 69 aaKnown RBP3.05□□□□□ -1.92
TRAV3-201ENST00000390425 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
TRAV3-201ENST00000390425 A6NED7 52 aa3.04□□□□□ -1.92
TRAV3-201ENST00000390425 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
TRAV3-201ENST00000390425 MT3P25713 68 aa3.02□□□□□ -1.93
TRAV3-201ENST00000390425 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
TRAV3-201ENST00000390425 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
TRAV3-201ENST00000390425 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
TRAV3-201ENST00000390425 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
TRAV3-201ENST00000390425 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
TRAV3-201ENST00000390425 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
TRAV3-201ENST00000390425 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
TRAV3-201ENST00000390425 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
TRAV3-201ENST00000390425 BRK1Q8WUW1 75 aa2.39□□□□□ -2.03
TRAV3-201ENST00000390425 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
TRAV3-201ENST00000390425 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
TRAV3-201ENST00000390425 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
TRAV3-201ENST00000390425 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
TRAV3-201ENST00000390425 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
TRAV3-201ENST00000390425 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
TRAV3-201ENST00000390425 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
TRAV3-201ENST00000390425 PRO0628Q9UI54 55 aa1.96□□□□□ -2.1
TRAV3-201ENST00000390425 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
TRAV3-201ENST00000390425 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
TRAV3-201ENST00000390425 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
TRAV3-201ENST00000390425 PRM1P04553 51 aa1.57□□□□□ -2.16
TRAV3-201ENST00000390425 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
TRAV3-201ENST00000390425 INE1O15225 51 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 42 ms