RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
TRBV4-1-201ENST00000390357 MT1MQ8N339 61 aa4.82□□□□□ -1.64
TRBV4-1-201ENST00000390357 MT1LQ93083 61 aa4.81□□□□□ -1.64
TRBV4-1-201ENST00000390357 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
TRBV4-1-201ENST00000390357 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
TRBV4-1-201ENST00000390357 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
TRBV4-1-201ENST00000390357 LINC01558Q9Y6Z2 57 aa4.77□□□□□ -1.65
TRBV4-1-201ENST00000390357 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
TRBV4-1-201ENST00000390357 MT4P47944 62 aa4.69□□□□□ -1.66
TRBV4-1-201ENST00000390357 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
TRBV4-1-201ENST00000390357 UQCR11O14957 56 aa4.67□□□□□ -1.66
TRBV4-1-201ENST00000390357 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
TRBV4-1-201ENST00000390357 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
TRBV4-1-201ENST00000390357 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
TRBV4-1-201ENST00000390357 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
TRBV4-1-201ENST00000390357 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
TRBV4-1-201ENST00000390357 GPR98Q8WXG9 6306 aa4.62□□□□□ -1.67
TRBV4-1-201ENST00000390357 V9GYY9 64 aa4.6□□□□□ -1.67
TRBV4-1-201ENST00000390357 PSPHP1O15172 72 aa4.56□□□□□ -1.68
TRBV4-1-201ENST00000390357 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
TRBV4-1-201ENST00000390357 Q1T7F1 81 aa4.56□□□□□ -1.68
TRBV4-1-201ENST00000390357 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
TRBV4-1-201ENST00000390357 K7ERS5 55 aa4.53□□□□□ -1.68
TRBV4-1-201ENST00000390357 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
TRBV4-1-201ENST00000390357 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
TRBV4-1-201ENST00000390357 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
TRBV4-1-201ENST00000390357 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
TRBV4-1-201ENST00000390357 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
TRBV4-1-201ENST00000390357 A6NED7 52 aa4.43□□□□□ -1.7
TRBV4-1-201ENST00000390357 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
TRBV4-1-201ENST00000390357 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
TRBV4-1-201ENST00000390357 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
TRBV4-1-201ENST00000390357 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
TRBV4-1-201ENST00000390357 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
TRBV4-1-201ENST00000390357 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
TRBV4-1-201ENST00000390357 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
TRBV4-1-201ENST00000390357 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
TRBV4-1-201ENST00000390357 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
TRBV4-1-201ENST00000390357 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
TRBV4-1-201ENST00000390357 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
TRBV4-1-201ENST00000390357 ROMO1P60602 79 aa4.17□□□□□ -1.74
TRBV4-1-201ENST00000390357 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
TRBV4-1-201ENST00000390357 MT1AP04731 61 aa4.12□□□□□ -1.75
TRBV4-1-201ENST00000390357 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
TRBV4-1-201ENST00000390357 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
TRBV4-1-201ENST00000390357 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
TRBV4-1-201ENST00000390357 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
TRBV4-1-201ENST00000390357 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
TRBV4-1-201ENST00000390357 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
TRBV4-1-201ENST00000390357 MT3P25713 68 aa3.82□□□□□ -1.8
TRBV4-1-201ENST00000390357 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
TRBV4-1-201ENST00000390357 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
TRBV4-1-201ENST00000390357 PMAIP1Q13794 54 aa3.73□□□□□ -1.81
TRBV4-1-201ENST00000390357 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
TRBV4-1-201ENST00000390357 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
TRBV4-1-201ENST00000390357 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
TRBV4-1-201ENST00000390357 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
TRBV4-1-201ENST00000390357 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
TRBV4-1-201ENST00000390357 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
TRBV4-1-201ENST00000390357 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
TRBV4-1-201ENST00000390357 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
TRBV4-1-201ENST00000390357 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
TRBV4-1-201ENST00000390357 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
TRBV4-1-201ENST00000390357 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
TRBV4-1-201ENST00000390357 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
TRBV4-1-201ENST00000390357 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
TRBV4-1-201ENST00000390357 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
TRBV4-1-201ENST00000390357 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
TRBV4-1-201ENST00000390357 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TRBV4-1-201ENST00000390357 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
TRBV4-1-201ENST00000390357 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
TRBV4-1-201ENST00000390357 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
TRBV4-1-201ENST00000390357 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
TRBV4-1-201ENST00000390357 PRM1P04553 51 aa2.14□□□□□ -2.07
TRBV4-1-201ENST00000390357 INE1O15225 51 aa2.05□□□□□ -2.08
TRBV4-1-201ENST00000390357 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
TRBV4-1-201ENST00000390357 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 55.8 ms