RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
NKX3-2-201ENST00000382438 MT1GP13640 62 aa6.62□□□□□ -1.35
NKX3-2-201ENST00000382438 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
NKX3-2-201ENST00000382438 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
NKX3-2-201ENST00000382438 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
NKX3-2-201ENST00000382438 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
NKX3-2-201ENST00000382438 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
NKX3-2-201ENST00000382438 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.39
NKX3-2-201ENST00000382438 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
NKX3-2-201ENST00000382438 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
NKX3-2-201ENST00000382438 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
NKX3-2-201ENST00000382438 PRM1P04553 51 aa6.35□□□□□ -1.39
NKX3-2-201ENST00000382438 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
NKX3-2-201ENST00000382438 LCE2DQ5TA82 110 aaPredicted RBP6.27□□□□□ -1.41
NKX3-2-201ENST00000382438 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
NKX3-2-201ENST00000382438 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
NKX3-2-201ENST00000382438 MT1MQ8N339 61 aa6.17□□□□□ -1.42
NKX3-2-201ENST00000382438 KRTAP9-6A0A140TA67 174 aa6.12□□□□□ -1.43
NKX3-2-201ENST00000382438 LCE3DQ9BYE3 92 aa6.12□□□□□ -1.43
NKX3-2-201ENST00000382438 LCE3EQ5T5B0 92 aa6.09□□□□□ -1.43
NKX3-2-201ENST00000382438 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
NKX3-2-201ENST00000382438 MT1AP04731 61 aa6.03□□□□□ -1.44
NKX3-2-201ENST00000382438 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
NKX3-2-201ENST00000382438 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
NKX3-2-201ENST00000382438 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.46
NKX3-2-201ENST00000382438 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
NKX3-2-201ENST00000382438 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
NKX3-2-201ENST00000382438 KRTAP6-1Q3LI64 71 aa5.89□□□□□ -1.47
NKX3-2-201ENST00000382438 SYNE2Q8WXH0 6885 aaKnown RBP5.85□□□□□ -1.47
NKX3-2-201ENST00000382438 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
NKX3-2-201ENST00000382438 LCE1EQ5T753 118 aa5.7□□□□□ -1.5
NKX3-2-201ENST00000382438 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
NKX3-2-201ENST00000382438 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
NKX3-2-201ENST00000382438 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
NKX3-2-201ENST00000382438 MDN1Q9NU22 5596 aa5.52□□□□□ -1.53
NKX3-2-201ENST00000382438 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
NKX3-2-201ENST00000382438 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
NKX3-2-201ENST00000382438 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
NKX3-2-201ENST00000382438 SPRR2EP22531 72 aa5.22□□□□□ -1.57
NKX3-2-201ENST00000382438 SPRR2BP35325 72 aa5.22□□□□□ -1.57
NKX3-2-201ENST00000382438 SPRR2AP35326 72 aa5.22□□□□□ -1.57
NKX3-2-201ENST00000382438 NEBP20929 6669 aa5.1□□□□□ -1.59
NKX3-2-201ENST00000382438 SPRR2DP22532 72 aa5.01□□□□□ -1.61
NKX3-2-201ENST00000382438 MT3P25713 68 aa5□□□□□ -1.61
NKX3-2-201ENST00000382438 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
NKX3-2-201ENST00000382438 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
NKX3-2-201ENST00000382438 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
NKX3-2-201ENST00000382438 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
NKX3-2-201ENST00000382438 MUC19Q7Z5P9 8384 aa4.51□□□□□ -1.69
NKX3-2-201ENST00000382438 MT4P47944 62 aa4.5□□□□□ -1.69
NKX3-2-201ENST00000382438 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.71
NKX3-2-201ENST00000382438 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
NKX3-2-201ENST00000382438 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
NKX3-2-201ENST00000382438 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
NKX3-2-201ENST00000382438 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
NKX3-2-201ENST00000382438 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
NKX3-2-201ENST00000382438 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.74
NKX3-2-201ENST00000382438 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
NKX3-2-201ENST00000382438 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
NKX3-2-201ENST00000382438 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
NKX3-2-201ENST00000382438 KRTAP21-1Q3LI58 79 aa3.95□□□□□ -1.78
NKX3-2-201ENST00000382438 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
NKX3-2-201ENST00000382438 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
NKX3-2-201ENST00000382438 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
NKX3-2-201ENST00000382438 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
NKX3-2-201ENST00000382438 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
NKX3-2-201ENST00000382438 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
NKX3-2-201ENST00000382438 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
NKX3-2-201ENST00000382438 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
NKX3-2-201ENST00000382438 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
NKX3-2-201ENST00000382438 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
NKX3-2-201ENST00000382438 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
NKX3-2-201ENST00000382438 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
NKX3-2-201ENST00000382438 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
NKX3-2-201ENST00000382438 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
NKX3-2-201ENST00000382438 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
NKX3-2-201ENST00000382438 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms