RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 LRP2P98164 4655 aa1.68□□□□□ -2.14
PTPRD-203ENST00000381196 LCE2CQ5TA81 110 aa1.68□□□□□ -2.14
PTPRD-203ENST00000381196 KRTAP9-2Q9BYQ4 174 aa1.67□□□□□ -2.14
PTPRD-203ENST00000381196 KRTAP9-6A0A140TA67 174 aa1.67□□□□□ -2.14
PTPRD-203ENST00000381196 MT1AP04731 61 aa1.67□□□□□ -2.14
PTPRD-203ENST00000381196 LCE2DQ5TA82 110 aaPredicted RBP1.66□□□□□ -2.14
PTPRD-203ENST00000381196 MUC17Q685J3 4493 aa1.66□□□□□ -2.14
PTPRD-203ENST00000381196 MT1GP13640 62 aa1.65□□□□□ -2.14
PTPRD-203ENST00000381196 LCE3BQ5TA77 95 aa1.65□□□□□ -2.15
PTPRD-203ENST00000381196 LCE3EQ5T5B0 92 aa1.64□□□□□ -2.15
PTPRD-203ENST00000381196 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
PTPRD-203ENST00000381196 MT1BP07438 61 aa1.61□□□□□ -2.15
PTPRD-203ENST00000381196 KRTAP20-1Q3LI63 56 aa1.61□□□□□ -2.15
PTPRD-203ENST00000381196 KRTAP9-3Q9BYQ3 159 aa1.61□□□□□ -2.15
PTPRD-203ENST00000381196 MT4P47944 62 aa1.59□□□□□ -2.16
PTPRD-203ENST00000381196 KRTAP9-8Q9BYQ0 159 aa1.59□□□□□ -2.16
PTPRD-203ENST00000381196 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
PTPRD-203ENST00000381196 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
PTPRD-203ENST00000381196 KRTAP9-7A8MTY7 169 aa1.55□□□□□ -2.16
PTPRD-203ENST00000381196 KRTAP4-8A0A0G2JLE6 195 aa1.54□□□□□ -2.16
PTPRD-203ENST00000381196 KRTAP4-8Q9BYQ9 185 aa1.54□□□□□ -2.16
PTPRD-203ENST00000381196 KRTAP19-6Q3LI70 58 aa1.53□□□□□ -2.16
PTPRD-203ENST00000381196 MT1MQ8N339 61 aa1.53□□□□□ -2.16
PTPRD-203ENST00000381196 NEBP20929 6669 aa1.52□□□□□ -2.17
PTPRD-203ENST00000381196 LCE1DQ5T752 114 aa1.48□□□□□ -2.17
PTPRD-203ENST00000381196 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
PTPRD-203ENST00000381196 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
PTPRD-203ENST00000381196 PRM1P04553 51 aa1.45□□□□□ -2.18
PTPRD-203ENST00000381196 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.45□□□□□ -2.18
PTPRD-203ENST00000381196 LCE2AQ5TA79 106 aaPredicted RBP1.44□□□□□ -2.18
PTPRD-203ENST00000381196 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
PTPRD-203ENST00000381196 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
PTPRD-203ENST00000381196 KRTAP19-7Q3SYF9 63 aa1.42□□□□□ -2.18
PTPRD-203ENST00000381196 LCE5AQ5TCM9 118 aa1.42□□□□□ -2.18
PTPRD-203ENST00000381196 KRTAP2-2Q9BYT5 123 aa1.42□□□□□ -2.18
PTPRD-203ENST00000381196 LCE1AQ5T7P2 110 aa1.41□□□□□ -2.18
PTPRD-203ENST00000381196 KRTAP4-7Q9BYR0 210 aa1.41□□□□□ -2.18
PTPRD-203ENST00000381196 LCE4AQ5TA78 99 aa1.39□□□□□ -2.19
PTPRD-203ENST00000381196 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
PTPRD-203ENST00000381196 KRTAP4-9Q9BYQ8 210 aa1.35□□□□□ -2.19
PTPRD-203ENST00000381196 KRTAP4-3Q9BYR4 195 aa1.34□□□□□ -2.19
PTPRD-203ENST00000381196 FSIP2Q5CZC0 6907 aa1.34□□□□□ -2.19
PTPRD-203ENST00000381196 KRTAP9-6A8MVA2 160 aa1.34□□□□□ -2.19
PTPRD-203ENST00000381196 LCE1CQ5T751 118 aa1.34□□□□□ -2.2
PTPRD-203ENST00000381196 LCE1EQ5T753 118 aa1.34□□□□□ -2.2
PTPRD-203ENST00000381196 LCE1FQ5T754 118 aa1.34□□□□□ -2.2
PTPRD-203ENST00000381196 LOC100996750A0A140TA64 210 aa1.34□□□□□ -2.2
PTPRD-203ENST00000381196 LPAP08519 4548 aa1.33□□□□□ -2.2
PTPRD-203ENST00000381196 KRTAP9-9Q9BYP9 154 aa1.29□□□□□ -2.2
PTPRD-203ENST00000381196 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
PTPRD-203ENST00000381196 KRTAP9-4Q9BYQ2 154 aa1.28□□□□□ -2.21
PTPRD-203ENST00000381196 KRTAP5-9P26371 169 aa1.23□□□□□ -2.21
PTPRD-203ENST00000381196 KRTAP6-1Q3LI64 71 aa1.23□□□□□ -2.21
PTPRD-203ENST00000381196 MACF1Q9UPN3 7388 aaKnown RBP1.22□□□□□ -2.21
PTPRD-203ENST00000381196 KRTAP5-4Q6L8H1 288 aa1.14□□□□□ -2.23
PTPRD-203ENST00000381196 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
PTPRD-203ENST00000381196 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
PTPRD-203ENST00000381196 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
PTPRD-203ENST00000381196 KRTAP4-6Q9BYQ5 205 aa1.08□□□□□ -2.24
PTPRD-203ENST00000381196 OBSCNQ5VST9 7968 aa1.07□□□□□ -2.24
PTPRD-203ENST00000381196 KRTAP4-11Q9BYQ6 195 aa1.04□□□□□ -2.24
PTPRD-203ENST00000381196 KRTAP5-2Q701N4 177 aa1.02□□□□□ -2.25
PTPRD-203ENST00000381196 KRTAP4-12Q9BQ66 201 aa1.02□□□□□ -2.25
PTPRD-203ENST00000381196 KRTAP4-2Q9BYR5 136 aa1.02□□□□□ -2.25
PTPRD-203ENST00000381196 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
PTPRD-203ENST00000381196 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
PTPRD-203ENST00000381196 KRTAP5-8O75690 187 aa0.99□□□□□ -2.25
PTPRD-203ENST00000381196 KRTAP4-4Q9BYR3 166 aa0.97□□□□□ -2.25
PTPRD-203ENST00000381196 KRTAP5-3Q6L8H2 238 aa0.95□□□□□ -2.26
PTPRD-203ENST00000381196 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
PTPRD-203ENST00000381196 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.94□□□□□ -2.26
PTPRD-203ENST00000381196 KRTAP5-1Q6L8H4 278 aa0.92□□□□□ -2.26
PTPRD-203ENST00000381196 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
PTPRD-203ENST00000381196 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
PTPRD-203ENST00000381196 KRTAP5-11Q6L8G4 156 aa0.84□□□□□ -2.27
PTPRD-203ENST00000381196 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
PTPRD-203ENST00000381196 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms