RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
PDX1-201ENST00000381033 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
PDX1-201ENST00000381033 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.47
PDX1-201ENST00000381033 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
PDX1-201ENST00000381033 KRTAP9-2Q9BYQ4 174 aa5.8□□□□□ -1.48
PDX1-201ENST00000381033 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
PDX1-201ENST00000381033 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
PDX1-201ENST00000381033 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
PDX1-201ENST00000381033 MT1MQ8N339 61 aa5.69□□□□□ -1.5
PDX1-201ENST00000381033 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
PDX1-201ENST00000381033 MT1GP13640 62 aa5.67□□□□□ -1.5
PDX1-201ENST00000381033 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
PDX1-201ENST00000381033 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
PDX1-201ENST00000381033 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
PDX1-201ENST00000381033 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
PDX1-201ENST00000381033 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
PDX1-201ENST00000381033 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
PDX1-201ENST00000381033 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
PDX1-201ENST00000381033 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
PDX1-201ENST00000381033 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
PDX1-201ENST00000381033 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
PDX1-201ENST00000381033 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
PDX1-201ENST00000381033 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
PDX1-201ENST00000381033 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
PDX1-201ENST00000381033 SPRR2EP22531 72 aa5.29□□□□□ -1.56
PDX1-201ENST00000381033 SPRR2BP35325 72 aa5.29□□□□□ -1.56
PDX1-201ENST00000381033 SPRR2AP35326 72 aa5.29□□□□□ -1.56
PDX1-201ENST00000381033 KRTAP4-12Q9BQ66 201 aa5.27□□□□□ -1.57
PDX1-201ENST00000381033 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
PDX1-201ENST00000381033 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
PDX1-201ENST00000381033 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
PDX1-201ENST00000381033 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
PDX1-201ENST00000381033 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.58
PDX1-201ENST00000381033 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
PDX1-201ENST00000381033 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
PDX1-201ENST00000381033 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
PDX1-201ENST00000381033 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
PDX1-201ENST00000381033 SPRR2DP22532 72 aa5.05□□□□□ -1.6
PDX1-201ENST00000381033 LCE1FQ5T754 118 aa5.03□□□□□ -1.6
PDX1-201ENST00000381033 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
PDX1-201ENST00000381033 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
PDX1-201ENST00000381033 MT1AP04731 61 aa5.01□□□□□ -1.61
PDX1-201ENST00000381033 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
PDX1-201ENST00000381033 PRM1P04553 51 aa4.82□□□□□ -1.64
PDX1-201ENST00000381033 NEBP20929 6669 aa4.79□□□□□ -1.64
PDX1-201ENST00000381033 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
PDX1-201ENST00000381033 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
PDX1-201ENST00000381033 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
PDX1-201ENST00000381033 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
PDX1-201ENST00000381033 MT4P47944 62 aa4.53□□□□□ -1.68
PDX1-201ENST00000381033 MT3P25713 68 aa4.51□□□□□ -1.69
PDX1-201ENST00000381033 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
PDX1-201ENST00000381033 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.7
PDX1-201ENST00000381033 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
PDX1-201ENST00000381033 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
PDX1-201ENST00000381033 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
PDX1-201ENST00000381033 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
PDX1-201ENST00000381033 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
PDX1-201ENST00000381033 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
PDX1-201ENST00000381033 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
PDX1-201ENST00000381033 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
PDX1-201ENST00000381033 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
PDX1-201ENST00000381033 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
PDX1-201ENST00000381033 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
PDX1-201ENST00000381033 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
PDX1-201ENST00000381033 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
PDX1-201ENST00000381033 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.88
PDX1-201ENST00000381033 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
PDX1-201ENST00000381033 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
PDX1-201ENST00000381033 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
PDX1-201ENST00000381033 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
PDX1-201ENST00000381033 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
PDX1-201ENST00000381033 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
PDX1-201ENST00000381033 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
PDX1-201ENST00000381033 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
PDX1-201ENST00000381033 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
PDX1-201ENST00000381033 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms