RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 MT1GP13640 62 aa7.37□□□□□ -1.23
GMDS-202ENST00000380815 MUC12Q9UKN1 5478 aa7.36□□□□□ -1.23
GMDS-202ENST00000380815 KRTAP5-9P26371 169 aa7.33□□□□□ -1.24
GMDS-202ENST00000380815 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
GMDS-202ENST00000380815 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
GMDS-202ENST00000380815 MT1MQ8N339 61 aa7.28□□□□□ -1.24
GMDS-202ENST00000380815 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
GMDS-202ENST00000380815 KRTAP9-6A8MVA2 160 aa7.24□□□□□ -1.25
GMDS-202ENST00000380815 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
GMDS-202ENST00000380815 H3BS24 57 aa7.2□□□□□ -1.26
GMDS-202ENST00000380815 KRTAP4-3Q9BYR4 195 aa7.15□□□□□ -1.27
GMDS-202ENST00000380815 LCE1AQ5T7P2 110 aa7.12□□□□□ -1.27
GMDS-202ENST00000380815 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
GMDS-202ENST00000380815 MDN1Q9NU22 5596 aa7.02□□□□□ -1.29
GMDS-202ENST00000380815 SPRR2EP22531 72 aa7.02□□□□□ -1.29
GMDS-202ENST00000380815 SPRR2BP35325 72 aa7.02□□□□□ -1.29
GMDS-202ENST00000380815 SPRR2AP35326 72 aa7.02□□□□□ -1.29
GMDS-202ENST00000380815 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
GMDS-202ENST00000380815 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
GMDS-202ENST00000380815 DSTQ03001 7570 aaKnown RBP6.83□□□□□ -1.32
GMDS-202ENST00000380815 KRTAP2-3P0C7H8 128 aa6.77□□□□□ -1.33
GMDS-202ENST00000380815 KRTAP2-4Q9BYR9 128 aa6.77□□□□□ -1.33
GMDS-202ENST00000380815 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
GMDS-202ENST00000380815 SPRR2DP22532 72 aa6.76□□□□□ -1.33
GMDS-202ENST00000380815 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
GMDS-202ENST00000380815 NEBP20929 6669 aa6.57□□□□□ -1.36
GMDS-202ENST00000380815 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
GMDS-202ENST00000380815 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
GMDS-202ENST00000380815 MT1AP04731 61 aa6.47□□□□□ -1.37
GMDS-202ENST00000380815 KRTAP6-1Q3LI64 71 aa6.41□□□□□ -1.38
GMDS-202ENST00000380815 INE1O15225 51 aa6.37□□□□□ -1.39
GMDS-202ENST00000380815 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
GMDS-202ENST00000380815 SYNE1Q8NF91 8797 aaKnown RBP6.17□□□□□ -1.42
GMDS-202ENST00000380815 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
GMDS-202ENST00000380815 KRTAP2-2Q9BYT5 123 aa6.05□□□□□ -1.44
GMDS-202ENST00000380815 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
GMDS-202ENST00000380815 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
GMDS-202ENST00000380815 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
GMDS-202ENST00000380815 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
GMDS-202ENST00000380815 KRTAP6-2Q3LI66 62 aa5.88□□□□□ -1.47
GMDS-202ENST00000380815 MT3P25713 68 aa5.86□□□□□ -1.47
GMDS-202ENST00000380815 MT4P47944 62 aa5.86□□□□□ -1.47
GMDS-202ENST00000380815 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
GMDS-202ENST00000380815 LCE3DQ9BYE3 92 aa5.77□□□□□ -1.49
GMDS-202ENST00000380815 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
GMDS-202ENST00000380815 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
GMDS-202ENST00000380815 HMCN1Q96RW7 5635 aa5.65□□□□□ -1.5
GMDS-202ENST00000380815 KRTAP5-2Q701N4 177 aa5.63□□□□□ -1.51
GMDS-202ENST00000380815 LCE3EQ5T5B0 92 aa5.62□□□□□ -1.51
GMDS-202ENST00000380815 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
GMDS-202ENST00000380815 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
GMDS-202ENST00000380815 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
GMDS-202ENST00000380815 PRM1P04553 51 aa4.99□□□□□ -1.61
GMDS-202ENST00000380815 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
GMDS-202ENST00000380815 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
GMDS-202ENST00000380815 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
GMDS-202ENST00000380815 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
GMDS-202ENST00000380815 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
GMDS-202ENST00000380815 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
GMDS-202ENST00000380815 LCE1CQ5T751 118 aa4.71□□□□□ -1.66
GMDS-202ENST00000380815 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
GMDS-202ENST00000380815 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
GMDS-202ENST00000380815 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.66
GMDS-202ENST00000380815 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
GMDS-202ENST00000380815 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
GMDS-202ENST00000380815 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
GMDS-202ENST00000380815 KRTAP21-2Q3LI59 83 aa4.21□□□□□ -1.74
GMDS-202ENST00000380815 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
GMDS-202ENST00000380815 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
GMDS-202ENST00000380815 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
GMDS-202ENST00000380815 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.81
GMDS-202ENST00000380815 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
GMDS-202ENST00000380815 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
GMDS-202ENST00000380815 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
GMDS-202ENST00000380815 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
GMDS-202ENST00000380815 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
GMDS-202ENST00000380815 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms