RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 MT1FP04733 61 aa2.94□□□□□ -1.94
NHLRC3-201ENST00000379599 MT2AP02795 61 aa2.92□□□□□ -1.94
NHLRC3-201ENST00000379599 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.94
NHLRC3-201ENST00000379599 KRTAP9-8Q9BYQ0 159 aa2.88□□□□□ -1.95
NHLRC3-201ENST00000379599 KMT2DO14686 5537 aa2.87□□□□□ -1.95
NHLRC3-201ENST00000379599 MT1BP07438 61 aa2.87□□□□□ -1.95
NHLRC3-201ENST00000379599 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
NHLRC3-201ENST00000379599 KRTAP4-9Q9BYQ8 210 aa2.85□□□□□ -1.95
NHLRC3-201ENST00000379599 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
NHLRC3-201ENST00000379599 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
NHLRC3-201ENST00000379599 KRTAP9-3Q9BYQ3 159 aa2.79□□□□□ -1.96
NHLRC3-201ENST00000379599 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
NHLRC3-201ENST00000379599 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
NHLRC3-201ENST00000379599 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
NHLRC3-201ENST00000379599 KRTAP6-3Q3LI67 103 aa2.73□□□□□ -1.97
NHLRC3-201ENST00000379599 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
NHLRC3-201ENST00000379599 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
NHLRC3-201ENST00000379599 PRM1P04553 51 aa2.69□□□□□ -1.98
NHLRC3-201ENST00000379599 CRCT1Q9UGL9 99 aa2.68□□□□□ -1.98
NHLRC3-201ENST00000379599 KRTAP19-7Q3SYF9 63 aa2.64□□□□□ -1.99
NHLRC3-201ENST00000379599 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
NHLRC3-201ENST00000379599 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
NHLRC3-201ENST00000379599 MT1LQ93083 61 aa2.62□□□□□ -1.99
NHLRC3-201ENST00000379599 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
NHLRC3-201ENST00000379599 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
NHLRC3-201ENST00000379599 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
NHLRC3-201ENST00000379599 MT1GP13640 62 aa2.59□□□□□ -1.99
NHLRC3-201ENST00000379599 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
NHLRC3-201ENST00000379599 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
NHLRC3-201ENST00000379599 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
NHLRC3-201ENST00000379599 SYNE2Q8WXH0 6885 aaKnown RBP2.53□□□□□ -2
NHLRC3-201ENST00000379599 MT1EP04732 61 aa2.52□□□□□ -2.01
NHLRC3-201ENST00000379599 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
NHLRC3-201ENST00000379599 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
NHLRC3-201ENST00000379599 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
NHLRC3-201ENST00000379599 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
NHLRC3-201ENST00000379599 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
NHLRC3-201ENST00000379599 MT1AP04731 61 aa2.41□□□□□ -2.02
NHLRC3-201ENST00000379599 MDN1Q9NU22 5596 aa2.4□□□□□ -2.02
NHLRC3-201ENST00000379599 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.02
NHLRC3-201ENST00000379599 KRTAP19-6Q3LI70 58 aa2.38□□□□□ -2.03
NHLRC3-201ENST00000379599 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
NHLRC3-201ENST00000379599 MT1MQ8N339 61 aa2.34□□□□□ -2.03
NHLRC3-201ENST00000379599 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
NHLRC3-201ENST00000379599 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
NHLRC3-201ENST00000379599 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
NHLRC3-201ENST00000379599 SPRR2EP22531 72 aa2.17□□□□□ -2.06
NHLRC3-201ENST00000379599 SPRR2BP35325 72 aa2.17□□□□□ -2.06
NHLRC3-201ENST00000379599 SPRR2AP35326 72 aa2.17□□□□□ -2.06
NHLRC3-201ENST00000379599 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
NHLRC3-201ENST00000379599 SPRR2DP22532 72 aa2.07□□□□□ -2.08
NHLRC3-201ENST00000379599 KRTAP5-9P26371 169 aa2.01□□□□□ -2.09
NHLRC3-201ENST00000379599 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
NHLRC3-201ENST00000379599 NEBP20929 6669 aa1.97□□□□□ -2.09
NHLRC3-201ENST00000379599 MT3P25713 68 aa1.94□□□□□ -2.1
NHLRC3-201ENST00000379599 MT4P47944 62 aa1.93□□□□□ -2.1
NHLRC3-201ENST00000379599 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
NHLRC3-201ENST00000379599 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
NHLRC3-201ENST00000379599 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
NHLRC3-201ENST00000379599 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
NHLRC3-201ENST00000379599 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
NHLRC3-201ENST00000379599 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
NHLRC3-201ENST00000379599 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
NHLRC3-201ENST00000379599 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
NHLRC3-201ENST00000379599 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
NHLRC3-201ENST00000379599 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
NHLRC3-201ENST00000379599 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
NHLRC3-201ENST00000379599 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
NHLRC3-201ENST00000379599 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
NHLRC3-201ENST00000379599 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
NHLRC3-201ENST00000379599 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
NHLRC3-201ENST00000379599 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
NHLRC3-201ENST00000379599 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
NHLRC3-201ENST00000379599 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
NHLRC3-201ENST00000379599 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
NHLRC3-201ENST00000379599 PHGR1C9JFL3 82 aa1□□□□□ -2.25
NHLRC3-201ENST00000379599 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms