RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
OPTN-202ENST00000378747 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
OPTN-202ENST00000378747 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
OPTN-202ENST00000378747 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
OPTN-202ENST00000378747 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
OPTN-202ENST00000378747 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
OPTN-202ENST00000378747 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
OPTN-202ENST00000378747 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
OPTN-202ENST00000378747 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
OPTN-202ENST00000378747 KRTAP4-8A0A0G2JLE6 195 aa3.14□□□□□ -1.91
OPTN-202ENST00000378747 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
OPTN-202ENST00000378747 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
OPTN-202ENST00000378747 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
OPTN-202ENST00000378747 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
OPTN-202ENST00000378747 MT1EP04732 61 aa3.11□□□□□ -1.91
OPTN-202ENST00000378747 MT1LQ93083 61 aa3.1□□□□□ -1.91
OPTN-202ENST00000378747 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.92
OPTN-202ENST00000378747 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
OPTN-202ENST00000378747 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
OPTN-202ENST00000378747 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
OPTN-202ENST00000378747 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
OPTN-202ENST00000378747 NEBP20929 6669 aa2.99□□□□□ -1.93
OPTN-202ENST00000378747 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
OPTN-202ENST00000378747 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
OPTN-202ENST00000378747 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
OPTN-202ENST00000378747 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
OPTN-202ENST00000378747 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
OPTN-202ENST00000378747 MT1MQ8N339 61 aa2.88□□□□□ -1.95
OPTN-202ENST00000378747 MT1GP13640 62 aa2.87□□□□□ -1.95
OPTN-202ENST00000378747 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
OPTN-202ENST00000378747 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
OPTN-202ENST00000378747 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
OPTN-202ENST00000378747 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
OPTN-202ENST00000378747 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
OPTN-202ENST00000378747 SPRR2EP22531 72 aa2.76□□□□□ -1.97
OPTN-202ENST00000378747 SPRR2BP35325 72 aa2.76□□□□□ -1.97
OPTN-202ENST00000378747 SPRR2AP35326 72 aa2.76□□□□□ -1.97
OPTN-202ENST00000378747 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
OPTN-202ENST00000378747 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
OPTN-202ENST00000378747 KRTAP2-2Q9BYT5 123 aa2.75□□□□□ -1.97
OPTN-202ENST00000378747 MT1AP04731 61 aa2.72□□□□□ -1.97
OPTN-202ENST00000378747 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
OPTN-202ENST00000378747 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
OPTN-202ENST00000378747 SPRR2DP22532 72 aa2.68□□□□□ -1.98
OPTN-202ENST00000378747 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
OPTN-202ENST00000378747 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
OPTN-202ENST00000378747 PRM1P04553 51 aa2.5□□□□□ -2.01
OPTN-202ENST00000378747 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
OPTN-202ENST00000378747 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
OPTN-202ENST00000378747 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
OPTN-202ENST00000378747 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
OPTN-202ENST00000378747 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
OPTN-202ENST00000378747 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
OPTN-202ENST00000378747 MT3P25713 68 aa2.3□□□□□ -2.04
OPTN-202ENST00000378747 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
OPTN-202ENST00000378747 MT4P47944 62 aa2.29□□□□□ -2.04
OPTN-202ENST00000378747 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
OPTN-202ENST00000378747 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
OPTN-202ENST00000378747 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
OPTN-202ENST00000378747 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
OPTN-202ENST00000378747 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
OPTN-202ENST00000378747 LCE1EQ5T753 118 aa2.09□□□□□ -2.08
OPTN-202ENST00000378747 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
OPTN-202ENST00000378747 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
OPTN-202ENST00000378747 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
OPTN-202ENST00000378747 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
OPTN-202ENST00000378747 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
OPTN-202ENST00000378747 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
OPTN-202ENST00000378747 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
OPTN-202ENST00000378747 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
OPTN-202ENST00000378747 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
OPTN-202ENST00000378747 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
OPTN-202ENST00000378747 LCE1FQ5T754 118 aa1.75□□□□□ -2.13
OPTN-202ENST00000378747 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
OPTN-202ENST00000378747 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
OPTN-202ENST00000378747 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
OPTN-202ENST00000378747 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms