RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
PCDHA4-201ENST00000378125 KRTAP9-6A0A140TA67 174 aa6.49□□□□□ -1.37
PCDHA4-201ENST00000378125 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
PCDHA4-201ENST00000378125 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
PCDHA4-201ENST00000378125 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
PCDHA4-201ENST00000378125 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
PCDHA4-201ENST00000378125 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
PCDHA4-201ENST00000378125 MT1MQ8N339 61 aa6.36□□□□□ -1.39
PCDHA4-201ENST00000378125 MT1GP13640 62 aa6.34□□□□□ -1.39
PCDHA4-201ENST00000378125 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
PCDHA4-201ENST00000378125 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
PCDHA4-201ENST00000378125 KRTAP2-1Q9BYU5 128 aa6.29□□□□□ -1.4
PCDHA4-201ENST00000378125 DSTQ03001 7570 aaKnown RBP6.29□□□□□ -1.4
PCDHA4-201ENST00000378125 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
PCDHA4-201ENST00000378125 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
PCDHA4-201ENST00000378125 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
PCDHA4-201ENST00000378125 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
PCDHA4-201ENST00000378125 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
PCDHA4-201ENST00000378125 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
PCDHA4-201ENST00000378125 SPRR2EP22531 72 aa5.87□□□□□ -1.47
PCDHA4-201ENST00000378125 SPRR2BP35325 72 aa5.87□□□□□ -1.47
PCDHA4-201ENST00000378125 SPRR2AP35326 72 aa5.87□□□□□ -1.47
PCDHA4-201ENST00000378125 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
PCDHA4-201ENST00000378125 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
PCDHA4-201ENST00000378125 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
PCDHA4-201ENST00000378125 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
PCDHA4-201ENST00000378125 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
PCDHA4-201ENST00000378125 KRTAP4-9Q9BYQ8 210 aa5.66□□□□□ -1.5
PCDHA4-201ENST00000378125 MT1AP04731 61 aa5.64□□□□□ -1.51
PCDHA4-201ENST00000378125 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
PCDHA4-201ENST00000378125 SPRR2DP22532 72 aa5.62□□□□□ -1.51
PCDHA4-201ENST00000378125 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
PCDHA4-201ENST00000378125 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
PCDHA4-201ENST00000378125 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
PCDHA4-201ENST00000378125 LCE3DQ9BYE3 92 aa5.32□□□□□ -1.56
PCDHA4-201ENST00000378125 NEBP20929 6669 aa5.22□□□□□ -1.57
PCDHA4-201ENST00000378125 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
PCDHA4-201ENST00000378125 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
PCDHA4-201ENST00000378125 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
PCDHA4-201ENST00000378125 MT3P25713 68 aa5.09□□□□□ -1.59
PCDHA4-201ENST00000378125 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
PCDHA4-201ENST00000378125 KRTAP5-4Q6L8H1 288 aa5.06□□□□□ -1.6
PCDHA4-201ENST00000378125 MT4P47944 62 aa5.01□□□□□ -1.61
PCDHA4-201ENST00000378125 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
PCDHA4-201ENST00000378125 PRM1P04553 51 aa4.9□□□□□ -1.62
PCDHA4-201ENST00000378125 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
PCDHA4-201ENST00000378125 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
PCDHA4-201ENST00000378125 LCE4AQ5TA78 99 aa4.8□□□□□ -1.64
PCDHA4-201ENST00000378125 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
PCDHA4-201ENST00000378125 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
PCDHA4-201ENST00000378125 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
PCDHA4-201ENST00000378125 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
PCDHA4-201ENST00000378125 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
PCDHA4-201ENST00000378125 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
PCDHA4-201ENST00000378125 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
PCDHA4-201ENST00000378125 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
PCDHA4-201ENST00000378125 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
PCDHA4-201ENST00000378125 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
PCDHA4-201ENST00000378125 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
PCDHA4-201ENST00000378125 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
PCDHA4-201ENST00000378125 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
PCDHA4-201ENST00000378125 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
PCDHA4-201ENST00000378125 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
PCDHA4-201ENST00000378125 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
PCDHA4-201ENST00000378125 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
PCDHA4-201ENST00000378125 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
PCDHA4-201ENST00000378125 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
PCDHA4-201ENST00000378125 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
PCDHA4-201ENST00000378125 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
PCDHA4-201ENST00000378125 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
PCDHA4-201ENST00000378125 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
PCDHA4-201ENST00000378125 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
PCDHA4-201ENST00000378125 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
PCDHA4-201ENST00000378125 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
PCDHA4-201ENST00000378125 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
PCDHA4-201ENST00000378125 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
PCDHA4-201ENST00000378125 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 94.7 ms