RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
POLR1E-201ENST00000377792 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
POLR1E-201ENST00000377792 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
POLR1E-201ENST00000377792 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
POLR1E-201ENST00000377792 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
POLR1E-201ENST00000377792 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
POLR1E-201ENST00000377792 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
POLR1E-201ENST00000377792 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
POLR1E-201ENST00000377792 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
POLR1E-201ENST00000377792 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
POLR1E-201ENST00000377792 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
POLR1E-201ENST00000377792 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
POLR1E-201ENST00000377792 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
POLR1E-201ENST00000377792 MT1MQ8N339 61 aa3.59□□□□□ -1.84
POLR1E-201ENST00000377792 MT1GP13640 62 aa3.58□□□□□ -1.84
POLR1E-201ENST00000377792 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
POLR1E-201ENST00000377792 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
POLR1E-201ENST00000377792 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
POLR1E-201ENST00000377792 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
POLR1E-201ENST00000377792 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
POLR1E-201ENST00000377792 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
POLR1E-201ENST00000377792 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
POLR1E-201ENST00000377792 NEBP20929 6669 aa3.36□□□□□ -1.87
POLR1E-201ENST00000377792 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
POLR1E-201ENST00000377792 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
POLR1E-201ENST00000377792 SPRR2EP22531 72 aa3.27□□□□□ -1.89
POLR1E-201ENST00000377792 SPRR2BP35325 72 aa3.27□□□□□ -1.89
POLR1E-201ENST00000377792 SPRR2AP35326 72 aa3.27□□□□□ -1.89
POLR1E-201ENST00000377792 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
POLR1E-201ENST00000377792 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
POLR1E-201ENST00000377792 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
POLR1E-201ENST00000377792 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
POLR1E-201ENST00000377792 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
POLR1E-201ENST00000377792 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
POLR1E-201ENST00000377792 MT1AP04731 61 aa3.22□□□□□ -1.89
POLR1E-201ENST00000377792 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
POLR1E-201ENST00000377792 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
POLR1E-201ENST00000377792 SPRR2DP22532 72 aa3.16□□□□□ -1.9
POLR1E-201ENST00000377792 LCE1DQ5T752 114 aa3.11□□□□□ -1.91
POLR1E-201ENST00000377792 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
POLR1E-201ENST00000377792 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
POLR1E-201ENST00000377792 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
POLR1E-201ENST00000377792 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.93
POLR1E-201ENST00000377792 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
POLR1E-201ENST00000377792 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
POLR1E-201ENST00000377792 MT3P25713 68 aa2.89□□□□□ -1.95
POLR1E-201ENST00000377792 PRM1P04553 51 aa2.86□□□□□ -1.95
POLR1E-201ENST00000377792 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.96
POLR1E-201ENST00000377792 MT4P47944 62 aa2.77□□□□□ -1.97
POLR1E-201ENST00000377792 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
POLR1E-201ENST00000377792 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
POLR1E-201ENST00000377792 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
POLR1E-201ENST00000377792 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
POLR1E-201ENST00000377792 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.98
POLR1E-201ENST00000377792 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
POLR1E-201ENST00000377792 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
POLR1E-201ENST00000377792 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
POLR1E-201ENST00000377792 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
POLR1E-201ENST00000377792 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
POLR1E-201ENST00000377792 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
POLR1E-201ENST00000377792 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
POLR1E-201ENST00000377792 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
POLR1E-201ENST00000377792 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
POLR1E-201ENST00000377792 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
POLR1E-201ENST00000377792 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
POLR1E-201ENST00000377792 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
POLR1E-201ENST00000377792 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
POLR1E-201ENST00000377792 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
POLR1E-201ENST00000377792 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
POLR1E-201ENST00000377792 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
POLR1E-201ENST00000377792 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
POLR1E-201ENST00000377792 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
POLR1E-201ENST00000377792 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
POLR1E-201ENST00000377792 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
POLR1E-201ENST00000377792 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
POLR1E-201ENST00000377792 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
POLR1E-201ENST00000377792 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 80.1 ms