RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 KRTAP2-3P0C7H8 128 aa8.07□□□□□ -1.12
SNX5-201ENST00000377759 KRTAP2-4Q9BYR9 128 aa8.07□□□□□ -1.12
SNX5-201ENST00000377759 KRTAP2-1Q9BYU5 128 aa8.07□□□□□ -1.12
SNX5-201ENST00000377759 KRTAP4-3Q9BYR4 195 aa7.95□□□□□ -1.14
SNX5-201ENST00000377759 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
SNX5-201ENST00000377759 KRTAP19-3Q7Z4W3 81 aa7.91□□□□□ -1.14
SNX5-201ENST00000377759 MT1MQ8N339 61 aa7.89□□□□□ -1.15
SNX5-201ENST00000377759 MT1GP13640 62 aa7.87□□□□□ -1.15
SNX5-201ENST00000377759 LOC100996750A0A140TA64 210 aa7.86□□□□□ -1.15
SNX5-201ENST00000377759 CRCT1Q9UGL9 99 aa7.73□□□□□ -1.17
SNX5-201ENST00000377759 LCE5AQ5TCM9 118 aa7.69□□□□□ -1.18
SNX5-201ENST00000377759 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
SNX5-201ENST00000377759 MACF1Q9UPN3 7388 aaKnown RBP7.62□□□□□ -1.19
SNX5-201ENST00000377759 KRTAP9-6A0A140TA67 174 aa7.58□□□□□ -1.2
SNX5-201ENST00000377759 DSTQ03001 7570 aaKnown RBP7.47□□□□□ -1.21
SNX5-201ENST00000377759 SYNE2Q8WXH0 6885 aaKnown RBP7.36□□□□□ -1.23
SNX5-201ENST00000377759 KRTAP5-9P26371 169 aa7.28□□□□□ -1.24
SNX5-201ENST00000377759 MDN1Q9NU22 5596 aa7.27□□□□□ -1.25
SNX5-201ENST00000377759 LCE1AQ5T7P2 110 aa7.26□□□□□ -1.25
SNX5-201ENST00000377759 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
SNX5-201ENST00000377759 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
SNX5-201ENST00000377759 KRTAP6-1Q3LI64 71 aa7.12□□□□□ -1.27
SNX5-201ENST00000377759 MT1AP04731 61 aa7.06□□□□□ -1.28
SNX5-201ENST00000377759 SPRR2EP22531 72 aa7.04□□□□□ -1.28
SNX5-201ENST00000377759 SPRR2BP35325 72 aa7.04□□□□□ -1.28
SNX5-201ENST00000377759 SPRR2AP35326 72 aa7.04□□□□□ -1.28
SNX5-201ENST00000377759 KRTAP12-4P60329 112 aa7.04□□□□□ -1.28
SNX5-201ENST00000377759 KRTAP5-5Q701N2 237 aaPredicted RBP7.03□□□□□ -1.28
SNX5-201ENST00000377759 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
SNX5-201ENST00000377759 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
SNX5-201ENST00000377759 SYNE1Q8NF91 8797 aaKnown RBP6.86□□□□□ -1.31
SNX5-201ENST00000377759 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
SNX5-201ENST00000377759 SPRR2DP22532 72 aa6.74□□□□□ -1.33
SNX5-201ENST00000377759 LCE3DQ9BYE3 92 aa6.68□□□□□ -1.34
SNX5-201ENST00000377759 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
SNX5-201ENST00000377759 LCE3EQ5T5B0 92 aa6.57□□□□□ -1.36
SNX5-201ENST00000377759 NEBP20929 6669 aa6.49□□□□□ -1.37
SNX5-201ENST00000377759 KRTAP6-2Q3LI66 62 aa6.41□□□□□ -1.38
SNX5-201ENST00000377759 MT3P25713 68 aa6.33□□□□□ -1.4
SNX5-201ENST00000377759 KRTAP5-4Q6L8H1 288 aa6.29□□□□□ -1.4
SNX5-201ENST00000377759 PRM1P04553 51 aa6.19□□□□□ -1.42
SNX5-201ENST00000377759 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
SNX5-201ENST00000377759 KRTAP20-1Q3LI63 56 aa6.06□□□□□ -1.44
SNX5-201ENST00000377759 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
SNX5-201ENST00000377759 MT4P47944 62 aa5.94□□□□□ -1.46
SNX5-201ENST00000377759 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
SNX5-201ENST00000377759 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
SNX5-201ENST00000377759 KRTAP20-2Q3LI61 65 aa5.87□□□□□ -1.47
SNX5-201ENST00000377759 KRTAP5-2Q701N4 177 aa5.85□□□□□ -1.47
SNX5-201ENST00000377759 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.5
SNX5-201ENST00000377759 LCE1DQ5T752 114 aa5.65□□□□□ -1.5
SNX5-201ENST00000377759 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
SNX5-201ENST00000377759 MUC5ACP98088 5654 aa5.32□□□□□ -1.56
SNX5-201ENST00000377759 LCE1EQ5T753 118 aa5.26□□□□□ -1.57
SNX5-201ENST00000377759 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
SNX5-201ENST00000377759 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
SNX5-201ENST00000377759 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
SNX5-201ENST00000377759 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
SNX5-201ENST00000377759 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
SNX5-201ENST00000377759 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
SNX5-201ENST00000377759 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
SNX5-201ENST00000377759 KRTAP5-8O75690 187 aa4.71□□□□□ -1.66
SNX5-201ENST00000377759 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
SNX5-201ENST00000377759 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
SNX5-201ENST00000377759 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
SNX5-201ENST00000377759 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
SNX5-201ENST00000377759 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
SNX5-201ENST00000377759 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
SNX5-201ENST00000377759 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
SNX5-201ENST00000377759 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.76
SNX5-201ENST00000377759 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
SNX5-201ENST00000377759 KRTAP21-1Q3LI58 79 aa3.9□□□□□ -1.79
SNX5-201ENST00000377759 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
SNX5-201ENST00000377759 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
SNX5-201ENST00000377759 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
SNX5-201ENST00000377759 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
SNX5-201ENST00000377759 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms