RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
SEC23B-203ENST00000377465 MT1LQ93083 61 aa3.81□□□□□ -1.8
SEC23B-203ENST00000377465 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
SEC23B-203ENST00000377465 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
SEC23B-203ENST00000377465 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
SEC23B-203ENST00000377465 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
SEC23B-203ENST00000377465 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
SEC23B-203ENST00000377465 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
SEC23B-203ENST00000377465 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
SEC23B-203ENST00000377465 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
SEC23B-203ENST00000377465 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
SEC23B-203ENST00000377465 MT1GP13640 62 aa3.72□□□□□ -1.81
SEC23B-203ENST00000377465 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
SEC23B-203ENST00000377465 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
SEC23B-203ENST00000377465 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
SEC23B-203ENST00000377465 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
SEC23B-203ENST00000377465 MT1MQ8N339 61 aa3.65□□□□□ -1.83
SEC23B-203ENST00000377465 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
SEC23B-203ENST00000377465 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
SEC23B-203ENST00000377465 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
SEC23B-203ENST00000377465 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
SEC23B-203ENST00000377465 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
SEC23B-203ENST00000377465 SPRR2EP22531 72 aa3.48□□□□□ -1.85
SEC23B-203ENST00000377465 SPRR2BP35325 72 aa3.48□□□□□ -1.85
SEC23B-203ENST00000377465 SPRR2AP35326 72 aa3.48□□□□□ -1.85
SEC23B-203ENST00000377465 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
SEC23B-203ENST00000377465 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
SEC23B-203ENST00000377465 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
SEC23B-203ENST00000377465 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
SEC23B-203ENST00000377465 NEBP20929 6669 aa3.42□□□□□ -1.86
SEC23B-203ENST00000377465 SPRR2DP22532 72 aa3.38□□□□□ -1.87
SEC23B-203ENST00000377465 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
SEC23B-203ENST00000377465 MT1AP04731 61 aa3.28□□□□□ -1.88
SEC23B-203ENST00000377465 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
SEC23B-203ENST00000377465 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
SEC23B-203ENST00000377465 KRTAP4-9Q9BYQ8 210 aa3.17□□□□□ -1.9
SEC23B-203ENST00000377465 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
SEC23B-203ENST00000377465 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
SEC23B-203ENST00000377465 PRM1P04553 51 aa3.12□□□□□ -1.91
SEC23B-203ENST00000377465 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
SEC23B-203ENST00000377465 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
SEC23B-203ENST00000377465 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
SEC23B-203ENST00000377465 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
SEC23B-203ENST00000377465 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
SEC23B-203ENST00000377465 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
SEC23B-203ENST00000377465 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
SEC23B-203ENST00000377465 MT3P25713 68 aa2.92□□□□□ -1.94
SEC23B-203ENST00000377465 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
SEC23B-203ENST00000377465 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
SEC23B-203ENST00000377465 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
SEC23B-203ENST00000377465 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
SEC23B-203ENST00000377465 MT4P47944 62 aa2.86□□□□□ -1.95
SEC23B-203ENST00000377465 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
SEC23B-203ENST00000377465 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -2
SEC23B-203ENST00000377465 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
SEC23B-203ENST00000377465 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
SEC23B-203ENST00000377465 KRTAP5-8O75690 187 aa2.55□□□□□ -2
SEC23B-203ENST00000377465 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2.01
SEC23B-203ENST00000377465 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
SEC23B-203ENST00000377465 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
SEC23B-203ENST00000377465 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
SEC23B-203ENST00000377465 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
SEC23B-203ENST00000377465 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
SEC23B-203ENST00000377465 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
SEC23B-203ENST00000377465 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
SEC23B-203ENST00000377465 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
SEC23B-203ENST00000377465 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
SEC23B-203ENST00000377465 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
SEC23B-203ENST00000377465 KRTAP9-9Q9BYP9 154 aa2.2□□□□□ -2.06
SEC23B-203ENST00000377465 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
SEC23B-203ENST00000377465 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SEC23B-203ENST00000377465 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
SEC23B-203ENST00000377465 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
SEC23B-203ENST00000377465 KRTAP4-12Q9BQ66 201 aa1.99□□□□□ -2.09
SEC23B-203ENST00000377465 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
SEC23B-203ENST00000377465 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
SEC23B-203ENST00000377465 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 76.9 ms