RNA–Protein interactions for RNA: ENST00000377447.7

CBWD1-204, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-204ENST00000377447 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
CBWD1-204ENST00000377447 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
CBWD1-204ENST00000377447 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
CBWD1-204ENST00000377447 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
CBWD1-204ENST00000377447 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
CBWD1-204ENST00000377447 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.84
CBWD1-204ENST00000377447 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
CBWD1-204ENST00000377447 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
CBWD1-204ENST00000377447 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
CBWD1-204ENST00000377447 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
CBWD1-204ENST00000377447 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
CBWD1-204ENST00000377447 MT1EP04732 61 aa3.49□□□□□ -1.85
CBWD1-204ENST00000377447 MT1LQ93083 61 aa3.47□□□□□ -1.85
CBWD1-204ENST00000377447 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.85
CBWD1-204ENST00000377447 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.85
CBWD1-204ENST00000377447 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
CBWD1-204ENST00000377447 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
CBWD1-204ENST00000377447 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
CBWD1-204ENST00000377447 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
CBWD1-204ENST00000377447 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
CBWD1-204ENST00000377447 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
CBWD1-204ENST00000377447 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
CBWD1-204ENST00000377447 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
CBWD1-204ENST00000377447 MT1GP13640 62 aa3.28□□□□□ -1.88
CBWD1-204ENST00000377447 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
CBWD1-204ENST00000377447 MT1MQ8N339 61 aa3.28□□□□□ -1.88
CBWD1-204ENST00000377447 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
CBWD1-204ENST00000377447 SPRR2EP22531 72 aa3.25□□□□□ -1.89
CBWD1-204ENST00000377447 SPRR2BP35325 72 aa3.25□□□□□ -1.89
CBWD1-204ENST00000377447 SPRR2AP35326 72 aa3.25□□□□□ -1.89
CBWD1-204ENST00000377447 INE1O15225 51 aa3.25□□□□□ -1.89
CBWD1-204ENST00000377447 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
CBWD1-204ENST00000377447 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
CBWD1-204ENST00000377447 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
CBWD1-204ENST00000377447 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
CBWD1-204ENST00000377447 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
CBWD1-204ENST00000377447 NEBP20929 6669 aa3.17□□□□□ -1.9
CBWD1-204ENST00000377447 SPRR2DP22532 72 aa3.13□□□□□ -1.91
CBWD1-204ENST00000377447 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
CBWD1-204ENST00000377447 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
CBWD1-204ENST00000377447 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
CBWD1-204ENST00000377447 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
CBWD1-204ENST00000377447 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
CBWD1-204ENST00000377447 MT1AP04731 61 aa2.9□□□□□ -1.95
CBWD1-204ENST00000377447 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
CBWD1-204ENST00000377447 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
CBWD1-204ENST00000377447 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
CBWD1-204ENST00000377447 MT4P47944 62 aa2.76□□□□□ -1.97
CBWD1-204ENST00000377447 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
CBWD1-204ENST00000377447 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
CBWD1-204ENST00000377447 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
CBWD1-204ENST00000377447 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
CBWD1-204ENST00000377447 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
CBWD1-204ENST00000377447 MT3P25713 68 aa2.63□□□□□ -1.99
CBWD1-204ENST00000377447 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
CBWD1-204ENST00000377447 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
CBWD1-204ENST00000377447 PRM1P04553 51 aa2.53□□□□□ -2
CBWD1-204ENST00000377447 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.01
CBWD1-204ENST00000377447 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
CBWD1-204ENST00000377447 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
CBWD1-204ENST00000377447 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
CBWD1-204ENST00000377447 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
CBWD1-204ENST00000377447 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CBWD1-204ENST00000377447 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
CBWD1-204ENST00000377447 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
CBWD1-204ENST00000377447 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
CBWD1-204ENST00000377447 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
CBWD1-204ENST00000377447 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
CBWD1-204ENST00000377447 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
CBWD1-204ENST00000377447 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
CBWD1-204ENST00000377447 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
CBWD1-204ENST00000377447 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
CBWD1-204ENST00000377447 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
CBWD1-204ENST00000377447 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
CBWD1-204ENST00000377447 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
CBWD1-204ENST00000377447 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CBWD1-204ENST00000377447 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 49.7 ms