RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
SF1-203ENST00000377387 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
SF1-203ENST00000377387 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
SF1-203ENST00000377387 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
SF1-203ENST00000377387 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
SF1-203ENST00000377387 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
SF1-203ENST00000377387 MT1GP13640 62 aa5.96□□□□□ -1.45
SF1-203ENST00000377387 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.45
SF1-203ENST00000377387 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
SF1-203ENST00000377387 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
SF1-203ENST00000377387 MT1MQ8N339 61 aa5.83□□□□□ -1.48
SF1-203ENST00000377387 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
SF1-203ENST00000377387 MDN1Q9NU22 5596 aa5.78□□□□□ -1.48
SF1-203ENST00000377387 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
SF1-203ENST00000377387 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
SF1-203ENST00000377387 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
SF1-203ENST00000377387 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
SF1-203ENST00000377387 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
SF1-203ENST00000377387 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
SF1-203ENST00000377387 KRTAP9-2Q9BYQ4 174 aa5.49□□□□□ -1.53
SF1-203ENST00000377387 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
SF1-203ENST00000377387 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
SF1-203ENST00000377387 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
SF1-203ENST00000377387 SPRR2EP22531 72 aa5.24□□□□□ -1.57
SF1-203ENST00000377387 SPRR2BP35325 72 aa5.24□□□□□ -1.57
SF1-203ENST00000377387 SPRR2AP35326 72 aa5.24□□□□□ -1.57
SF1-203ENST00000377387 MT1AP04731 61 aa5.19□□□□□ -1.58
SF1-203ENST00000377387 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
SF1-203ENST00000377387 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.58
SF1-203ENST00000377387 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
SF1-203ENST00000377387 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
SF1-203ENST00000377387 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
SF1-203ENST00000377387 SPRR2DP22532 72 aa5□□□□□ -1.61
SF1-203ENST00000377387 PRM1P04553 51 aa4.94□□□□□ -1.62
SF1-203ENST00000377387 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
SF1-203ENST00000377387 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
SF1-203ENST00000377387 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
SF1-203ENST00000377387 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
SF1-203ENST00000377387 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
SF1-203ENST00000377387 MT3P25713 68 aa4.69□□□□□ -1.66
SF1-203ENST00000377387 NEBP20929 6669 aa4.65□□□□□ -1.66
SF1-203ENST00000377387 MT4P47944 62 aa4.56□□□□□ -1.68
SF1-203ENST00000377387 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
SF1-203ENST00000377387 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
SF1-203ENST00000377387 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
SF1-203ENST00000377387 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
SF1-203ENST00000377387 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
SF1-203ENST00000377387 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
SF1-203ENST00000377387 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
SF1-203ENST00000377387 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
SF1-203ENST00000377387 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
SF1-203ENST00000377387 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SF1-203ENST00000377387 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
SF1-203ENST00000377387 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SF1-203ENST00000377387 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
SF1-203ENST00000377387 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
SF1-203ENST00000377387 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
SF1-203ENST00000377387 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
SF1-203ENST00000377387 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
SF1-203ENST00000377387 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
SF1-203ENST00000377387 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
SF1-203ENST00000377387 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
SF1-203ENST00000377387 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
SF1-203ENST00000377387 KRTAP5-8O75690 187 aa3.4□□□□□ -1.86
SF1-203ENST00000377387 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
SF1-203ENST00000377387 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
SF1-203ENST00000377387 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
SF1-203ENST00000377387 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
SF1-203ENST00000377387 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
SF1-203ENST00000377387 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
SF1-203ENST00000377387 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
SF1-203ENST00000377387 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
SF1-203ENST00000377387 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
SF1-203ENST00000377387 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
SF1-203ENST00000377387 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SF1-203ENST00000377387 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
SF1-203ENST00000377387 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms