RNA–Protein interactions for RNA: ENST00000377191.4

XRN2-201, Transcript of 5'-3' exoribonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRN2, Length 3,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2-201ENST00000377191 MT1LQ93083 61 aa3.18□□□□□ -1.9
XRN2-201ENST00000377191 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
XRN2-201ENST00000377191 MT1EP04732 61 aa3.16□□□□□ -1.9
XRN2-201ENST00000377191 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
XRN2-201ENST00000377191 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
XRN2-201ENST00000377191 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
XRN2-201ENST00000377191 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
XRN2-201ENST00000377191 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
XRN2-201ENST00000377191 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
XRN2-201ENST00000377191 MT1GP13640 62 aa2.97□□□□□ -1.93
XRN2-201ENST00000377191 MT1MQ8N339 61 aa2.95□□□□□ -1.94
XRN2-201ENST00000377191 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
XRN2-201ENST00000377191 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
XRN2-201ENST00000377191 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
XRN2-201ENST00000377191 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
XRN2-201ENST00000377191 KRTAP9-6A0A140TA67 174 aa2.85□□□□□ -1.95
XRN2-201ENST00000377191 MDN1Q9NU22 5596 aa2.84□□□□□ -1.96
XRN2-201ENST00000377191 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
XRN2-201ENST00000377191 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
XRN2-201ENST00000377191 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
XRN2-201ENST00000377191 LCE3BQ5TA77 95 aa2.78□□□□□ -1.96
XRN2-201ENST00000377191 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
XRN2-201ENST00000377191 MT1AP04731 61 aa2.74□□□□□ -1.97
XRN2-201ENST00000377191 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
XRN2-201ENST00000377191 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
XRN2-201ENST00000377191 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
XRN2-201ENST00000377191 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
XRN2-201ENST00000377191 KRTAP9-7A8MTY7 169 aa2.59□□□□□ -1.99
XRN2-201ENST00000377191 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.59□□□□□ -1.99
XRN2-201ENST00000377191 PRM1P04553 51 aa2.58□□□□□ -2
XRN2-201ENST00000377191 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
XRN2-201ENST00000377191 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
XRN2-201ENST00000377191 KRTAP9-4Q9BYQ2 154 aa2.5□□□□□ -2.01
XRN2-201ENST00000377191 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
XRN2-201ENST00000377191 SPRR2EP22531 72 aa2.47□□□□□ -2.01
XRN2-201ENST00000377191 SPRR2BP35325 72 aa2.47□□□□□ -2.01
XRN2-201ENST00000377191 SPRR2AP35326 72 aa2.47□□□□□ -2.01
XRN2-201ENST00000377191 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.01
XRN2-201ENST00000377191 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
XRN2-201ENST00000377191 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.03
XRN2-201ENST00000377191 MT3P25713 68 aa2.39□□□□□ -2.03
XRN2-201ENST00000377191 LCE4AQ5TA78 99 aa2.37□□□□□ -2.03
XRN2-201ENST00000377191 SPRR2DP22532 72 aa2.36□□□□□ -2.03
XRN2-201ENST00000377191 NEBP20929 6669 aa2.33□□□□□ -2.04
XRN2-201ENST00000377191 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
XRN2-201ENST00000377191 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
XRN2-201ENST00000377191 KRTAP9-9Q9BYP9 154 aa2.22□□□□□ -2.05
XRN2-201ENST00000377191 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
XRN2-201ENST00000377191 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
XRN2-201ENST00000377191 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
XRN2-201ENST00000377191 MT4P47944 62 aa2.16□□□□□ -2.06
XRN2-201ENST00000377191 LCE1DQ5T752 114 aa2.12□□□□□ -2.07
XRN2-201ENST00000377191 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
XRN2-201ENST00000377191 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
XRN2-201ENST00000377191 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
XRN2-201ENST00000377191 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
XRN2-201ENST00000377191 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
XRN2-201ENST00000377191 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
XRN2-201ENST00000377191 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
XRN2-201ENST00000377191 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
XRN2-201ENST00000377191 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
XRN2-201ENST00000377191 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
XRN2-201ENST00000377191 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
XRN2-201ENST00000377191 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.12
XRN2-201ENST00000377191 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
XRN2-201ENST00000377191 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
XRN2-201ENST00000377191 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
XRN2-201ENST00000377191 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
XRN2-201ENST00000377191 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
XRN2-201ENST00000377191 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
XRN2-201ENST00000377191 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
XRN2-201ENST00000377191 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
XRN2-201ENST00000377191 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
XRN2-201ENST00000377191 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
XRN2-201ENST00000377191 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
XRN2-201ENST00000377191 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
XRN2-201ENST00000377191 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 146.8 ms