RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
NKX2-2-201ENST00000377142 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
NKX2-2-201ENST00000377142 MT1GP13640 62 aa5.92□□□□□ -1.46
NKX2-2-201ENST00000377142 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
NKX2-2-201ENST00000377142 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
NKX2-2-201ENST00000377142 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
NKX2-2-201ENST00000377142 MT1MQ8N339 61 aa5.88□□□□□ -1.47
NKX2-2-201ENST00000377142 INE1O15225 51 aa5.84□□□□□ -1.47
NKX2-2-201ENST00000377142 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
NKX2-2-201ENST00000377142 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
NKX2-2-201ENST00000377142 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
NKX2-2-201ENST00000377142 KRTAP5-9P26371 169 aa5.75□□□□□ -1.49
NKX2-2-201ENST00000377142 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
NKX2-2-201ENST00000377142 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
NKX2-2-201ENST00000377142 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
NKX2-2-201ENST00000377142 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
NKX2-2-201ENST00000377142 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.5
NKX2-2-201ENST00000377142 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
NKX2-2-201ENST00000377142 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
NKX2-2-201ENST00000377142 SPRR2EP22531 72 aa5.54□□□□□ -1.52
NKX2-2-201ENST00000377142 SPRR2BP35325 72 aa5.54□□□□□ -1.52
NKX2-2-201ENST00000377142 SPRR2AP35326 72 aa5.54□□□□□ -1.52
NKX2-2-201ENST00000377142 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
NKX2-2-201ENST00000377142 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
NKX2-2-201ENST00000377142 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
NKX2-2-201ENST00000377142 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
NKX2-2-201ENST00000377142 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
NKX2-2-201ENST00000377142 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
NKX2-2-201ENST00000377142 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
NKX2-2-201ENST00000377142 SPRR2DP22532 72 aa5.33□□□□□ -1.56
NKX2-2-201ENST00000377142 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
NKX2-2-201ENST00000377142 MT1AP04731 61 aa5.25□□□□□ -1.57
NKX2-2-201ENST00000377142 LCE1FQ5T754 118 aa5.25□□□□□ -1.57
NKX2-2-201ENST00000377142 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
NKX2-2-201ENST00000377142 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
NKX2-2-201ENST00000377142 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
NKX2-2-201ENST00000377142 MT3P25713 68 aa5.1□□□□□ -1.59
NKX2-2-201ENST00000377142 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
NKX2-2-201ENST00000377142 NEBP20929 6669 aa4.96□□□□□ -1.62
NKX2-2-201ENST00000377142 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
NKX2-2-201ENST00000377142 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
NKX2-2-201ENST00000377142 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
NKX2-2-201ENST00000377142 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
NKX2-2-201ENST00000377142 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
NKX2-2-201ENST00000377142 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
NKX2-2-201ENST00000377142 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
NKX2-2-201ENST00000377142 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
NKX2-2-201ENST00000377142 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
NKX2-2-201ENST00000377142 MT4P47944 62 aa4.61□□□□□ -1.67
NKX2-2-201ENST00000377142 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
NKX2-2-201ENST00000377142 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
NKX2-2-201ENST00000377142 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
NKX2-2-201ENST00000377142 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
NKX2-2-201ENST00000377142 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
NKX2-2-201ENST00000377142 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
NKX2-2-201ENST00000377142 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
NKX2-2-201ENST00000377142 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
NKX2-2-201ENST00000377142 PRM1P04553 51 aa4.23□□□□□ -1.73
NKX2-2-201ENST00000377142 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
NKX2-2-201ENST00000377142 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
NKX2-2-201ENST00000377142 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
NKX2-2-201ENST00000377142 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
NKX2-2-201ENST00000377142 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
NKX2-2-201ENST00000377142 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
NKX2-2-201ENST00000377142 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
NKX2-2-201ENST00000377142 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
NKX2-2-201ENST00000377142 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
NKX2-2-201ENST00000377142 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
NKX2-2-201ENST00000377142 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
NKX2-2-201ENST00000377142 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
NKX2-2-201ENST00000377142 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
NKX2-2-201ENST00000377142 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
NKX2-2-201ENST00000377142 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
NKX2-2-201ENST00000377142 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
NKX2-2-201ENST00000377142 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
NKX2-2-201ENST00000377142 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
NKX2-2-201ENST00000377142 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 88.9 ms