RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 DSTQ03001 7570 aaKnown RBP7.89□□□□□ -1.15
SRM-201ENST00000376957 MT1LQ93083 61 aa7.86□□□□□ -1.15
SRM-201ENST00000376957 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
SRM-201ENST00000376957 MT1MQ8N339 61 aa7.79□□□□□ -1.16
SRM-201ENST00000376957 GPR98Q8WXG9 6306 aa7.77□□□□□ -1.17
SRM-201ENST00000376957 A6NED7 52 aa7.77□□□□□ -1.17
SRM-201ENST00000376957 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
SRM-201ENST00000376957 RPS28P62857 69 aaKnown RBP7.68□□□□□ -1.18
SRM-201ENST00000376957 PCP4P48539 62 aa7.64□□□□□ -1.19
SRM-201ENST00000376957 KRTAP4-9Q9BYQ8 210 aa7.57□□□□□ -1.2
SRM-201ENST00000376957 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
SRM-201ENST00000376957 LCE4AQ5TA78 99 aa7.55□□□□□ -1.2
SRM-201ENST00000376957 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
SRM-201ENST00000376957 KRTAP4-3Q9BYR4 195 aa7.53□□□□□ -1.2
SRM-201ENST00000376957 KRTAP19-4Q3LI73 84 aa7.47□□□□□ -1.21
SRM-201ENST00000376957 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
SRM-201ENST00000376957 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
SRM-201ENST00000376957 MT4P47944 62 aa7.39□□□□□ -1.23
SRM-201ENST00000376957 ROMO1P60602 79 aa7.39□□□□□ -1.23
SRM-201ENST00000376957 KRTAP5-4Q6L8H1 288 aa7.33□□□□□ -1.24
SRM-201ENST00000376957 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
SRM-201ENST00000376957 HMCN1Q96RW7 5635 aa7.25□□□□□ -1.25
SRM-201ENST00000376957 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.26
SRM-201ENST00000376957 KRTAP4-6Q9BYQ5 205 aa7.14□□□□□ -1.27
SRM-201ENST00000376957 AHNAK2Q8IVF2 5795 aa7.1□□□□□ -1.27
SRM-201ENST00000376957 KRTAP5-5Q701N2 237 aaPredicted RBP7.09□□□□□ -1.27
SRM-201ENST00000376957 KRTAP12-4P60329 112 aa7.05□□□□□ -1.28
SRM-201ENST00000376957 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
SRM-201ENST00000376957 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
SRM-201ENST00000376957 KRTAP20-2Q3LI61 65 aa6.93□□□□□ -1.3
SRM-201ENST00000376957 KRTAP5-10Q6L8G5 202 aa6.88□□□□□ -1.31
SRM-201ENST00000376957 BRK1Q8WUW1 75 aa6.78□□□□□ -1.32
SRM-201ENST00000376957 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
SRM-201ENST00000376957 MT1AP04731 61 aa6.71□□□□□ -1.34
SRM-201ENST00000376957 KRTAP5-7Q6L8G8 165 aa6.68□□□□□ -1.34
SRM-201ENST00000376957 SYNE1Q8NF91 8797 aaKnown RBP6.65□□□□□ -1.34
SRM-201ENST00000376957 KRTAP6-1Q3LI64 71 aa6.61□□□□□ -1.35
SRM-201ENST00000376957 KRTAP9-6A8MVA2 160 aa6.6□□□□□ -1.35
SRM-201ENST00000376957 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
SRM-201ENST00000376957 KRTAP5-2Q701N4 177 aa6.44□□□□□ -1.38
SRM-201ENST00000376957 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
SRM-201ENST00000376957 KRTAP6-2Q3LI66 62 aa6.33□□□□□ -1.4
SRM-201ENST00000376957 KRTAP4-11Q9BYQ6 195 aa6.32□□□□□ -1.4
SRM-201ENST00000376957 MT3P25713 68 aa6.2□□□□□ -1.42
SRM-201ENST00000376957 KRTAP5-8O75690 187 aa6.06□□□□□ -1.44
SRM-201ENST00000376957 PRAC1Q96KF2 57 aa6□□□□□ -1.45
SRM-201ENST00000376957 OBSCNQ5VST9 7968 aa6□□□□□ -1.45
SRM-201ENST00000376957 AHNAKQ09666 5890 aaKnown RBP6□□□□□ -1.45
SRM-201ENST00000376957 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
SRM-201ENST00000376957 MUC5ACP98088 5654 aa5.89□□□□□ -1.47
SRM-201ENST00000376957 MUC5BQ9HC84 5762 aaPredicted RBP5.89□□□□□ -1.47
SRM-201ENST00000376957 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
SRM-201ENST00000376957 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
SRM-201ENST00000376957 KRTAP5-1Q6L8H4 278 aa5.74□□□□□ -1.49
SRM-201ENST00000376957 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
SRM-201ENST00000376957 LCE1EQ5T753 118 aa5.65□□□□□ -1.5
SRM-201ENST00000376957 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
SRM-201ENST00000376957 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
SRM-201ENST00000376957 LCE1CQ5T751 118 aa5.23□□□□□ -1.57
SRM-201ENST00000376957 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
SRM-201ENST00000376957 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
SRM-201ENST00000376957 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
SRM-201ENST00000376957 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
SRM-201ENST00000376957 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
SRM-201ENST00000376957 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
SRM-201ENST00000376957 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
SRM-201ENST00000376957 KRTAP21-2Q3LI59 83 aa4.34□□□□□ -1.71
SRM-201ENST00000376957 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
SRM-201ENST00000376957 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
SRM-201ENST00000376957 H3BS24 57 aa4.05□□□□□ -1.76
SRM-201ENST00000376957 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
SRM-201ENST00000376957 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
SRM-201ENST00000376957 PRM1P04553 51 aa3.73□□□□□ -1.81
SRM-201ENST00000376957 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
SRM-201ENST00000376957 INE1O15225 51 aa3.47□□□□□ -1.85
SRM-201ENST00000376957 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
SRM-201ENST00000376957 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms