RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TNP1P09430 55 aa5.22□□□□□ -1.57
HDAC6-204ENST00000376643 MT4P47944 62 aa5.2□□□□□ -1.58
HDAC6-204ENST00000376643 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
HDAC6-204ENST00000376643 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.59
HDAC6-204ENST00000376643 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
HDAC6-204ENST00000376643 PRR15LQ9BU68 103 aa5.13□□□□□ -1.59
HDAC6-204ENST00000376643 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
HDAC6-204ENST00000376643 PSPHP1O15172 72 aa5.09□□□□□ -1.59
HDAC6-204ENST00000376643 Q1T7F1 81 aa5.08□□□□□ -1.6
HDAC6-204ENST00000376643 RPS28P62857 69 aaKnown RBP5.07□□□□□ -1.6
HDAC6-204ENST00000376643 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
HDAC6-204ENST00000376643 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
HDAC6-204ENST00000376643 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
HDAC6-204ENST00000376643 UQCR11O14957 56 aa4.99□□□□□ -1.61
HDAC6-204ENST00000376643 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
HDAC6-204ENST00000376643 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
HDAC6-204ENST00000376643 V9GYY9 64 aa4.97□□□□□ -1.61
HDAC6-204ENST00000376643 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
HDAC6-204ENST00000376643 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
HDAC6-204ENST00000376643 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
HDAC6-204ENST00000376643 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
HDAC6-204ENST00000376643 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
HDAC6-204ENST00000376643 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
HDAC6-204ENST00000376643 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
HDAC6-204ENST00000376643 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
HDAC6-204ENST00000376643 A6NED7 52 aa4.84□□□□□ -1.63
HDAC6-204ENST00000376643 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
HDAC6-204ENST00000376643 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
HDAC6-204ENST00000376643 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
HDAC6-204ENST00000376643 K7ERS5 55 aa4.79□□□□□ -1.64
HDAC6-204ENST00000376643 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
HDAC6-204ENST00000376643 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
HDAC6-204ENST00000376643 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
HDAC6-204ENST00000376643 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
HDAC6-204ENST00000376643 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
HDAC6-204ENST00000376643 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
HDAC6-204ENST00000376643 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
HDAC6-204ENST00000376643 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
HDAC6-204ENST00000376643 ROMO1P60602 79 aa4.53□□□□□ -1.68
HDAC6-204ENST00000376643 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
HDAC6-204ENST00000376643 MT1AP04731 61 aa4.47□□□□□ -1.69
HDAC6-204ENST00000376643 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
HDAC6-204ENST00000376643 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
HDAC6-204ENST00000376643 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
HDAC6-204ENST00000376643 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
HDAC6-204ENST00000376643 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
HDAC6-204ENST00000376643 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
HDAC6-204ENST00000376643 H3BS24 57 aa4.22□□□□□ -1.73
HDAC6-204ENST00000376643 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
HDAC6-204ENST00000376643 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
HDAC6-204ENST00000376643 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
HDAC6-204ENST00000376643 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
HDAC6-204ENST00000376643 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
HDAC6-204ENST00000376643 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
HDAC6-204ENST00000376643 MT3P25713 68 aa4.14□□□□□ -1.75
HDAC6-204ENST00000376643 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
HDAC6-204ENST00000376643 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
HDAC6-204ENST00000376643 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
HDAC6-204ENST00000376643 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
HDAC6-204ENST00000376643 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
HDAC6-204ENST00000376643 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
HDAC6-204ENST00000376643 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
HDAC6-204ENST00000376643 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
HDAC6-204ENST00000376643 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
HDAC6-204ENST00000376643 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
HDAC6-204ENST00000376643 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
HDAC6-204ENST00000376643 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
HDAC6-204ENST00000376643 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
HDAC6-204ENST00000376643 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
HDAC6-204ENST00000376643 INE1O15225 51 aa3.13□□□□□ -1.91
HDAC6-204ENST00000376643 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
HDAC6-204ENST00000376643 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
HDAC6-204ENST00000376643 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
HDAC6-204ENST00000376643 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
HDAC6-204ENST00000376643 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
HDAC6-204ENST00000376643 PRM1P04553 51 aa2.4□□□□□ -2.03
HDAC6-204ENST00000376643 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
HDAC6-204ENST00000376643 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 102 ms