RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
HDAC6-203ENST00000376619 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
HDAC6-203ENST00000376619 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
HDAC6-203ENST00000376619 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-203ENST00000376619 INE1O15225 51 aa3.93□□□□□ -1.78
HDAC6-203ENST00000376619 MT1GP13640 62 aa3.91□□□□□ -1.78
HDAC6-203ENST00000376619 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
HDAC6-203ENST00000376619 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
HDAC6-203ENST00000376619 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
HDAC6-203ENST00000376619 SPRR2EP22531 72 aa3.82□□□□□ -1.8
HDAC6-203ENST00000376619 SPRR2BP35325 72 aa3.82□□□□□ -1.8
HDAC6-203ENST00000376619 SPRR2AP35326 72 aa3.82□□□□□ -1.8
HDAC6-203ENST00000376619 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
HDAC6-203ENST00000376619 MT1LQ93083 61 aa3.77□□□□□ -1.81
HDAC6-203ENST00000376619 MT1EP04732 61 aa3.76□□□□□ -1.81
HDAC6-203ENST00000376619 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
HDAC6-203ENST00000376619 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
HDAC6-203ENST00000376619 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
HDAC6-203ENST00000376619 SPRR2DP22532 72 aa3.67□□□□□ -1.82
HDAC6-203ENST00000376619 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
HDAC6-203ENST00000376619 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
HDAC6-203ENST00000376619 MT1MQ8N339 61 aa3.59□□□□□ -1.84
HDAC6-203ENST00000376619 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
HDAC6-203ENST00000376619 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
HDAC6-203ENST00000376619 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
HDAC6-203ENST00000376619 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
HDAC6-203ENST00000376619 NEBP20929 6669 aa3.47□□□□□ -1.85
HDAC6-203ENST00000376619 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
HDAC6-203ENST00000376619 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
HDAC6-203ENST00000376619 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
HDAC6-203ENST00000376619 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
HDAC6-203ENST00000376619 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
HDAC6-203ENST00000376619 MT4P47944 62 aa3.33□□□□□ -1.88
HDAC6-203ENST00000376619 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
HDAC6-203ENST00000376619 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
HDAC6-203ENST00000376619 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
HDAC6-203ENST00000376619 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
HDAC6-203ENST00000376619 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
HDAC6-203ENST00000376619 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
HDAC6-203ENST00000376619 MT1AP04731 61 aa3.14□□□□□ -1.91
HDAC6-203ENST00000376619 PRM1P04553 51 aa3.12□□□□□ -1.91
HDAC6-203ENST00000376619 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
HDAC6-203ENST00000376619 MT3P25713 68 aa3.05□□□□□ -1.92
HDAC6-203ENST00000376619 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
HDAC6-203ENST00000376619 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
HDAC6-203ENST00000376619 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
HDAC6-203ENST00000376619 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
HDAC6-203ENST00000376619 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
HDAC6-203ENST00000376619 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
HDAC6-203ENST00000376619 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
HDAC6-203ENST00000376619 LCE1EQ5T753 118 aa2.9□□□□□ -1.94
HDAC6-203ENST00000376619 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
HDAC6-203ENST00000376619 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
HDAC6-203ENST00000376619 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
HDAC6-203ENST00000376619 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
HDAC6-203ENST00000376619 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
HDAC6-203ENST00000376619 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
HDAC6-203ENST00000376619 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
HDAC6-203ENST00000376619 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
HDAC6-203ENST00000376619 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
HDAC6-203ENST00000376619 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
HDAC6-203ENST00000376619 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
HDAC6-203ENST00000376619 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
HDAC6-203ENST00000376619 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
HDAC6-203ENST00000376619 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
HDAC6-203ENST00000376619 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
HDAC6-203ENST00000376619 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
HDAC6-203ENST00000376619 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
HDAC6-203ENST00000376619 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
HDAC6-203ENST00000376619 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
HDAC6-203ENST00000376619 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
HDAC6-203ENST00000376619 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
HDAC6-203ENST00000376619 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
HDAC6-203ENST00000376619 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
HDAC6-203ENST00000376619 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
HDAC6-203ENST00000376619 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
HDAC6-203ENST00000376619 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms