RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 H7BZZ5 65 aa6.36□□□□□ -1.39
HDAC6-202ENST00000376610 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
HDAC6-202ENST00000376610 KRTAP5-10Q6L8G5 202 aa6.32□□□□□ -1.4
HDAC6-202ENST00000376610 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
HDAC6-202ENST00000376610 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
HDAC6-202ENST00000376610 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
HDAC6-202ENST00000376610 KRTAP5-7Q6L8G8 165 aa6.13□□□□□ -1.43
HDAC6-202ENST00000376610 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
HDAC6-202ENST00000376610 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
HDAC6-202ENST00000376610 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
HDAC6-202ENST00000376610 ANAPC13Q9BS18 74 aa6.05□□□□□ -1.44
HDAC6-202ENST00000376610 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
HDAC6-202ENST00000376610 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
HDAC6-202ENST00000376610 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-202ENST00000376610 ATP5EP56381 51 aaPredicted RBP6□□□□□ -1.45
HDAC6-202ENST00000376610 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
HDAC6-202ENST00000376610 UQCR11O14957 56 aa5.95□□□□□ -1.46
HDAC6-202ENST00000376610 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
HDAC6-202ENST00000376610 CCDC179H3BU77 68 aa5.9□□□□□ -1.46
HDAC6-202ENST00000376610 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
HDAC6-202ENST00000376610 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
HDAC6-202ENST00000376610 PCP4P48539 62 aa5.87□□□□□ -1.47
HDAC6-202ENST00000376610 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
HDAC6-202ENST00000376610 K7ERS5 55 aa5.8□□□□□ -1.48
HDAC6-202ENST00000376610 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
HDAC6-202ENST00000376610 TMEM258P61165 79 aa5.7□□□□□ -1.5
HDAC6-202ENST00000376610 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
HDAC6-202ENST00000376610 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
HDAC6-202ENST00000376610 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
HDAC6-202ENST00000376610 KRTAP4-11Q9BYQ6 195 aa5.63□□□□□ -1.51
HDAC6-202ENST00000376610 MT1AP04731 61 aa5.58□□□□□ -1.52
HDAC6-202ENST00000376610 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
HDAC6-202ENST00000376610 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
HDAC6-202ENST00000376610 PSPHP1O15172 72 aa5.5□□□□□ -1.53
HDAC6-202ENST00000376610 V9GYY9 64 aa5.5□□□□□ -1.53
HDAC6-202ENST00000376610 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
HDAC6-202ENST00000376610 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
HDAC6-202ENST00000376610 MUC5BQ9HC84 5762 aaPredicted RBP5.41□□□□□ -1.54
HDAC6-202ENST00000376610 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
HDAC6-202ENST00000376610 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
HDAC6-202ENST00000376610 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
HDAC6-202ENST00000376610 RPS28P62857 69 aaKnown RBP5.38□□□□□ -1.55
HDAC6-202ENST00000376610 Q1T7F1 81 aa5.38□□□□□ -1.55
HDAC6-202ENST00000376610 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
HDAC6-202ENST00000376610 A6NED7 52 aa5.33□□□□□ -1.56
HDAC6-202ENST00000376610 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
HDAC6-202ENST00000376610 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
HDAC6-202ENST00000376610 ROMO1P60602 79 aa5.28□□□□□ -1.56
HDAC6-202ENST00000376610 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
HDAC6-202ENST00000376610 MT3P25713 68 aa5.14□□□□□ -1.59
HDAC6-202ENST00000376610 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
HDAC6-202ENST00000376610 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
HDAC6-202ENST00000376610 H3BS24 57 aa4.82□□□□□ -1.64
HDAC6-202ENST00000376610 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
HDAC6-202ENST00000376610 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
HDAC6-202ENST00000376610 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
HDAC6-202ENST00000376610 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
HDAC6-202ENST00000376610 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
HDAC6-202ENST00000376610 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
HDAC6-202ENST00000376610 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
HDAC6-202ENST00000376610 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
HDAC6-202ENST00000376610 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
HDAC6-202ENST00000376610 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
HDAC6-202ENST00000376610 LCE1FQ5T754 118 aa4□□□□□ -1.77
HDAC6-202ENST00000376610 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-202ENST00000376610 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
HDAC6-202ENST00000376610 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
HDAC6-202ENST00000376610 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
HDAC6-202ENST00000376610 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
HDAC6-202ENST00000376610 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
HDAC6-202ENST00000376610 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
HDAC6-202ENST00000376610 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
HDAC6-202ENST00000376610 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
HDAC6-202ENST00000376610 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
HDAC6-202ENST00000376610 INE1O15225 51 aa3.13□□□□□ -1.91
HDAC6-202ENST00000376610 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
HDAC6-202ENST00000376610 PRM1P04553 51 aa2.67□□□□□ -1.98
HDAC6-202ENST00000376610 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 53.1 ms