RNA–Protein interactions for RNA: ENST00000376088.7

CLCN5-202, Transcript of chloride voltage-gated channel 5, humanhuman

TSL 2 BASIC

Gene CLCN5, Length 10,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-202ENST00000376088 FAT3Q8TDW7 4589 aa1.6□□□□□ -2.15
CLCN5-202ENST00000376088 MUC2Q02817 5179 aa1.6□□□□□ -2.15
CLCN5-202ENST00000376088 KRTAP9-3Q9BYQ3 159 aa1.59□□□□□ -2.15
CLCN5-202ENST00000376088 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
CLCN5-202ENST00000376088 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
CLCN5-202ENST00000376088 KRTAP19-2Q3LHN2 52 aa1.58□□□□□ -2.16
CLCN5-202ENST00000376088 LCE2BO14633 110 aa1.57□□□□□ -2.16
CLCN5-202ENST00000376088 LRP2P98164 4655 aa1.56□□□□□ -2.16
CLCN5-202ENST00000376088 SPRR2DP22532 72 aa1.55□□□□□ -2.16
CLCN5-202ENST00000376088 SPRR2EP22531 72 aa1.53□□□□□ -2.17
CLCN5-202ENST00000376088 MUC17Q685J3 4493 aa1.52□□□□□ -2.17
CLCN5-202ENST00000376088 LPAP08519 4548 aa1.5□□□□□ -2.17
CLCN5-202ENST00000376088 MACF1Q9UPN3 7388 aaKnown RBP1.5□□□□□ -2.17
CLCN5-202ENST00000376088 LCE2DQ5TA82 110 aaPredicted RBP1.5□□□□□ -2.17
CLCN5-202ENST00000376088 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
CLCN5-202ENST00000376088 KRTAP19-7Q3SYF9 63 aa1.49□□□□□ -2.17
CLCN5-202ENST00000376088 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
CLCN5-202ENST00000376088 KRTAP4-8A0A0G2JLE6 195 aa1.46□□□□□ -2.18
CLCN5-202ENST00000376088 KRTAP4-8Q9BYQ9 185 aa1.46□□□□□ -2.18
CLCN5-202ENST00000376088 LCE1AQ5T7P2 110 aa1.45□□□□□ -2.18
CLCN5-202ENST00000376088 KRTAP2-2Q9BYT5 123 aa1.43□□□□□ -2.18
CLCN5-202ENST00000376088 LCE2AQ5TA79 106 aaPredicted RBP1.42□□□□□ -2.18
CLCN5-202ENST00000376088 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
CLCN5-202ENST00000376088 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
CLCN5-202ENST00000376088 KRTAP9-2Q9BYQ4 174 aa1.41□□□□□ -2.18
CLCN5-202ENST00000376088 MDN1Q9NU22 5596 aa1.4□□□□□ -2.18
CLCN5-202ENST00000376088 KRTAP9-6A8MVA2 160 aa1.4□□□□□ -2.19
CLCN5-202ENST00000376088 KRTAP4-7Q9BYR0 210 aa1.38□□□□□ -2.19
CLCN5-202ENST00000376088 KRTAP9-4Q9BYQ2 154 aa1.37□□□□□ -2.19
CLCN5-202ENST00000376088 LCE5AQ5TCM9 118 aa1.37□□□□□ -2.19
CLCN5-202ENST00000376088 NEBP20929 6669 aa1.35□□□□□ -2.19
CLCN5-202ENST00000376088 KRTAP9-6A0A140TA67 174 aa1.34□□□□□ -2.2
CLCN5-202ENST00000376088 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
CLCN5-202ENST00000376088 LOC100996750A0A140TA64 210 aa1.31□□□□□ -2.2
CLCN5-202ENST00000376088 LCE4AQ5TA78 99 aa1.3□□□□□ -2.2
CLCN5-202ENST00000376088 KRTAP6-3Q3LI67 103 aa1.3□□□□□ -2.2
CLCN5-202ENST00000376088 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
CLCN5-202ENST00000376088 KRTAP9-7A8MTY7 169 aa1.28□□□□□ -2.21
CLCN5-202ENST00000376088 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
CLCN5-202ENST00000376088 LCE1DQ5T752 114 aa1.26□□□□□ -2.21
CLCN5-202ENST00000376088 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
CLCN5-202ENST00000376088 LCE1BQ5T7P3 118 aa1.24□□□□□ -2.21
CLCN5-202ENST00000376088 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
CLCN5-202ENST00000376088 KRTAP4-3Q9BYR4 195 aa1.23□□□□□ -2.21
CLCN5-202ENST00000376088 KRTAP4-9Q9BYQ8 210 aa1.22□□□□□ -2.21
CLCN5-202ENST00000376088 MT4P47944 62 aa1.21□□□□□ -2.22
CLCN5-202ENST00000376088 LCE1FQ5T754 118 aa1.17□□□□□ -2.22
CLCN5-202ENST00000376088 LCE1EQ5T753 118 aa1.16□□□□□ -2.22
CLCN5-202ENST00000376088 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
CLCN5-202ENST00000376088 KRTAP20-1Q3LI63 56 aa1.11□□□□□ -2.23
CLCN5-202ENST00000376088 HMCN1Q96RW7 5635 aa1.11□□□□□ -2.23
CLCN5-202ENST00000376088 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
CLCN5-202ENST00000376088 KRTAP5-9P26371 169 aa1.11□□□□□ -2.23
CLCN5-202ENST00000376088 KRTAP4-6Q9BYQ5 205 aa1.09□□□□□ -2.24
CLCN5-202ENST00000376088 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.08□□□□□ -2.24
CLCN5-202ENST00000376088 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
CLCN5-202ENST00000376088 KRTAP4-11Q9BYQ6 195 aa1.08□□□□□ -2.24
CLCN5-202ENST00000376088 KRTAP9-9Q9BYP9 154 aa1.02□□□□□ -2.25
CLCN5-202ENST00000376088 LCE1CQ5T751 118 aa1.01□□□□□ -2.25
CLCN5-202ENST00000376088 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
CLCN5-202ENST00000376088 KRTAP5-4Q6L8H1 288 aa0.98□□□□□ -2.25
CLCN5-202ENST00000376088 KRTAP4-12Q9BQ66 201 aa0.98□□□□□ -2.25
CLCN5-202ENST00000376088 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
CLCN5-202ENST00000376088 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
CLCN5-202ENST00000376088 KRTAP4-2Q9BYR5 136 aa0.95□□□□□ -2.26
CLCN5-202ENST00000376088 KRTAP4-4Q9BYR3 166 aa0.88□□□□□ -2.27
CLCN5-202ENST00000376088 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
CLCN5-202ENST00000376088 KRTAP5-2Q701N4 177 aa0.86□□□□□ -2.27
CLCN5-202ENST00000376088 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.86□□□□□ -2.27
CLCN5-202ENST00000376088 KRTAP5-3Q6L8H2 238 aa0.85□□□□□ -2.27
CLCN5-202ENST00000376088 KRTAP5-11Q6L8G4 156 aa0.82□□□□□ -2.28
CLCN5-202ENST00000376088 KRTAP5-1Q6L8H4 278 aa0.82□□□□□ -2.28
CLCN5-202ENST00000376088 KRTAP5-8O75690 187 aa0.79□□□□□ -2.28
CLCN5-202ENST00000376088 KRTAP5-7Q6L8G8 165 aa0.77□□□□□ -2.29
CLCN5-202ENST00000376088 KRTAP21-2Q3LI59 83 aa0.73□□□□□ -2.29
CLCN5-202ENST00000376088 PHGR1C9JFL3 82 aa0.65□□□□□ -2.3
CLCN5-202ENST00000376088 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 61.6 ms