RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 KRTAP4-8A0A0G2JLE6 195 aa2.57□□□□□ -2
HSPG2-203ENST00000374695 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
HSPG2-203ENST00000374695 ABCA13Q86UQ4 5058 aa2.55□□□□□ -2
HSPG2-203ENST00000374695 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2
HSPG2-203ENST00000374695 MT1AP04731 61 aa2.53□□□□□ -2
HSPG2-203ENST00000374695 MT1MQ8N339 61 aa2.51□□□□□ -2.01
HSPG2-203ENST00000374695 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
HSPG2-203ENST00000374695 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
HSPG2-203ENST00000374695 KRTAP4-7Q9BYR0 210 aa2.48□□□□□ -2.01
HSPG2-203ENST00000374695 MT4P47944 62 aa2.48□□□□□ -2.01
HSPG2-203ENST00000374695 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
HSPG2-203ENST00000374695 HMCN2Q8NDA2 5059 aa2.44□□□□□ -2.02
HSPG2-203ENST00000374695 LOC100996750A0A140TA64 210 aa2.39□□□□□ -2.03
HSPG2-203ENST00000374695 KRTAP19-6Q3LI70 58 aa2.36□□□□□ -2.03
HSPG2-203ENST00000374695 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.04
HSPG2-203ENST00000374695 KMT2DO14686 5537 aa2.33□□□□□ -2.04
HSPG2-203ENST00000374695 LCE5AQ5TCM9 118 aa2.32□□□□□ -2.04
HSPG2-203ENST00000374695 USH2AO75445 5202 aa2.31□□□□□ -2.04
HSPG2-203ENST00000374695 KRTAP4-9Q9BYQ8 210 aa2.3□□□□□ -2.04
HSPG2-203ENST00000374695 FCGBPQ9Y6R7 5405 aaPredicted RBP2.28□□□□□ -2.04
HSPG2-203ENST00000374695 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
HSPG2-203ENST00000374695 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
HSPG2-203ENST00000374695 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
HSPG2-203ENST00000374695 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
HSPG2-203ENST00000374695 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
HSPG2-203ENST00000374695 KRTAP9-2Q9BYQ4 174 aa2.22□□□□□ -2.05
HSPG2-203ENST00000374695 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
HSPG2-203ENST00000374695 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
HSPG2-203ENST00000374695 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
HSPG2-203ENST00000374695 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
HSPG2-203ENST00000374695 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
HSPG2-203ENST00000374695 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
HSPG2-203ENST00000374695 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
HSPG2-203ENST00000374695 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
HSPG2-203ENST00000374695 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
HSPG2-203ENST00000374695 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.06
HSPG2-203ENST00000374695 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.06
HSPG2-203ENST00000374695 LCE2AQ5TA79 106 aaPredicted RBP2.09□□□□□ -2.08
HSPG2-203ENST00000374695 KRTAP9-6A0A140TA67 174 aa2.09□□□□□ -2.08
HSPG2-203ENST00000374695 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
HSPG2-203ENST00000374695 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
HSPG2-203ENST00000374695 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
HSPG2-203ENST00000374695 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
HSPG2-203ENST00000374695 NEBP20929 6669 aa1.93□□□□□ -2.1
HSPG2-203ENST00000374695 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
HSPG2-203ENST00000374695 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
HSPG2-203ENST00000374695 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
HSPG2-203ENST00000374695 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
HSPG2-203ENST00000374695 KRTAP4-11Q9BYQ6 195 aa1.85□□□□□ -2.11
HSPG2-203ENST00000374695 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
HSPG2-203ENST00000374695 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
HSPG2-203ENST00000374695 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
HSPG2-203ENST00000374695 KRTAP5-5Q701N2 237 aaPredicted RBP1.72□□□□□ -2.13
HSPG2-203ENST00000374695 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
HSPG2-203ENST00000374695 KRTAP5-9P26371 169 aa1.69□□□□□ -2.14
HSPG2-203ENST00000374695 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
HSPG2-203ENST00000374695 KRTAP4-6Q9BYQ5 205 aa1.64□□□□□ -2.15
HSPG2-203ENST00000374695 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
HSPG2-203ENST00000374695 KRTAP5-4Q6L8H1 288 aa1.63□□□□□ -2.15
HSPG2-203ENST00000374695 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
HSPG2-203ENST00000374695 KRTAP4-2Q9BYR5 136 aa1.63□□□□□ -2.15
HSPG2-203ENST00000374695 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
HSPG2-203ENST00000374695 MACF1Q9UPN3 7388 aaKnown RBP1.61□□□□□ -2.15
HSPG2-203ENST00000374695 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
HSPG2-203ENST00000374695 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
HSPG2-203ENST00000374695 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
HSPG2-203ENST00000374695 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
HSPG2-203ENST00000374695 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
HSPG2-203ENST00000374695 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
HSPG2-203ENST00000374695 KRTAP5-2Q701N4 177 aa1.2□□□□□ -2.22
HSPG2-203ENST00000374695 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
HSPG2-203ENST00000374695 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.23
HSPG2-203ENST00000374695 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
HSPG2-203ENST00000374695 KRTAP5-1Q6L8H4 278 aa1.12□□□□□ -2.23
HSPG2-203ENST00000374695 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
HSPG2-203ENST00000374695 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
HSPG2-203ENST00000374695 KRTAP5-7Q6L8G8 165 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms