RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 LCE2DQ5TA82 110 aaPredicted RBP6.33□□□□□ -1.4
RXRB-202ENST00000374685 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
RXRB-202ENST00000374685 SYNE2Q8WXH0 6885 aaKnown RBP6.22□□□□□ -1.41
RXRB-202ENST00000374685 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
RXRB-202ENST00000374685 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
RXRB-202ENST00000374685 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
RXRB-202ENST00000374685 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
RXRB-202ENST00000374685 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
RXRB-202ENST00000374685 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
RXRB-202ENST00000374685 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
RXRB-202ENST00000374685 KRTAP19-3Q7Z4W3 81 aa6.08□□□□□ -1.44
RXRB-202ENST00000374685 MT1GP13640 62 aa6.07□□□□□ -1.44
RXRB-202ENST00000374685 MT1MQ8N339 61 aa6.04□□□□□ -1.44
RXRB-202ENST00000374685 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
RXRB-202ENST00000374685 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
RXRB-202ENST00000374685 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
RXRB-202ENST00000374685 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
RXRB-202ENST00000374685 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
RXRB-202ENST00000374685 SPRR2EP22531 72 aa5.68□□□□□ -1.5
RXRB-202ENST00000374685 SPRR2BP35325 72 aa5.68□□□□□ -1.5
RXRB-202ENST00000374685 SPRR2AP35326 72 aa5.68□□□□□ -1.5
RXRB-202ENST00000374685 KRTAP5-9P26371 169 aa5.61□□□□□ -1.51
RXRB-202ENST00000374685 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
RXRB-202ENST00000374685 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
RXRB-202ENST00000374685 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.47□□□□□ -1.53
RXRB-202ENST00000374685 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
RXRB-202ENST00000374685 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
RXRB-202ENST00000374685 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
RXRB-202ENST00000374685 SPRR2DP22532 72 aa5.43□□□□□ -1.54
RXRB-202ENST00000374685 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
RXRB-202ENST00000374685 MT1AP04731 61 aa5.33□□□□□ -1.56
RXRB-202ENST00000374685 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
RXRB-202ENST00000374685 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
RXRB-202ENST00000374685 NEBP20929 6669 aa5.09□□□□□ -1.59
RXRB-202ENST00000374685 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
RXRB-202ENST00000374685 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
RXRB-202ENST00000374685 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
RXRB-202ENST00000374685 PRM1P04553 51 aa5.01□□□□□ -1.61
RXRB-202ENST00000374685 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
RXRB-202ENST00000374685 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
RXRB-202ENST00000374685 MT4P47944 62 aa4.89□□□□□ -1.63
RXRB-202ENST00000374685 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
RXRB-202ENST00000374685 MT3P25713 68 aa4.83□□□□□ -1.64
RXRB-202ENST00000374685 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
RXRB-202ENST00000374685 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
RXRB-202ENST00000374685 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
RXRB-202ENST00000374685 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
RXRB-202ENST00000374685 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
RXRB-202ENST00000374685 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
RXRB-202ENST00000374685 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
RXRB-202ENST00000374685 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
RXRB-202ENST00000374685 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
RXRB-202ENST00000374685 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
RXRB-202ENST00000374685 MUC5ACP98088 5654 aa4.15□□□□□ -1.75
RXRB-202ENST00000374685 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
RXRB-202ENST00000374685 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
RXRB-202ENST00000374685 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
RXRB-202ENST00000374685 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
RXRB-202ENST00000374685 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
RXRB-202ENST00000374685 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
RXRB-202ENST00000374685 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
RXRB-202ENST00000374685 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
RXRB-202ENST00000374685 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
RXRB-202ENST00000374685 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
RXRB-202ENST00000374685 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
RXRB-202ENST00000374685 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
RXRB-202ENST00000374685 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
RXRB-202ENST00000374685 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
RXRB-202ENST00000374685 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
RXRB-202ENST00000374685 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
RXRB-202ENST00000374685 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
RXRB-202ENST00000374685 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
RXRB-202ENST00000374685 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
RXRB-202ENST00000374685 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
RXRB-202ENST00000374685 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
RXRB-202ENST00000374685 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
RXRB-202ENST00000374685 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 709.1 ms