RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 MT1EP04732 61 aa6.18□□□□□ -1.42
PHF1-201ENST00000374512 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
PHF1-201ENST00000374512 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
PHF1-201ENST00000374512 FCGBPQ9Y6R7 5405 aaPredicted RBP6.04□□□□□ -1.44
PHF1-201ENST00000374512 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
PHF1-201ENST00000374512 KRTAP19-3Q7Z4W3 81 aa5.82□□□□□ -1.48
PHF1-201ENST00000374512 MT1GP13640 62 aa5.8□□□□□ -1.48
PHF1-201ENST00000374512 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
PHF1-201ENST00000374512 MT1MQ8N339 61 aa5.78□□□□□ -1.48
PHF1-201ENST00000374512 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
PHF1-201ENST00000374512 MUC12Q9UKN1 5478 aa5.76□□□□□ -1.49
PHF1-201ENST00000374512 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
PHF1-201ENST00000374512 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
PHF1-201ENST00000374512 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
PHF1-201ENST00000374512 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
PHF1-201ENST00000374512 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
PHF1-201ENST00000374512 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
PHF1-201ENST00000374512 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
PHF1-201ENST00000374512 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
PHF1-201ENST00000374512 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.54
PHF1-201ENST00000374512 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
PHF1-201ENST00000374512 MDN1Q9NU22 5596 aa5.36□□□□□ -1.55
PHF1-201ENST00000374512 MT1AP04731 61 aa5.35□□□□□ -1.55
PHF1-201ENST00000374512 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
PHF1-201ENST00000374512 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
PHF1-201ENST00000374512 SPRR2EP22531 72 aa5.27□□□□□ -1.57
PHF1-201ENST00000374512 SPRR2BP35325 72 aa5.27□□□□□ -1.57
PHF1-201ENST00000374512 SPRR2AP35326 72 aa5.27□□□□□ -1.57
PHF1-201ENST00000374512 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
PHF1-201ENST00000374512 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
PHF1-201ENST00000374512 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
PHF1-201ENST00000374512 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
PHF1-201ENST00000374512 NEBP20929 6669 aa5.08□□□□□ -1.6
PHF1-201ENST00000374512 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
PHF1-201ENST00000374512 SPRR2DP22532 72 aa5.07□□□□□ -1.6
PHF1-201ENST00000374512 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
PHF1-201ENST00000374512 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
PHF1-201ENST00000374512 PRM1P04553 51 aa4.82□□□□□ -1.64
PHF1-201ENST00000374512 MT3P25713 68 aa4.72□□□□□ -1.65
PHF1-201ENST00000374512 KRTAP20-1Q3LI63 56 aa4.71□□□□□ -1.66
PHF1-201ENST00000374512 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
PHF1-201ENST00000374512 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
PHF1-201ENST00000374512 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
PHF1-201ENST00000374512 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
PHF1-201ENST00000374512 MT4P47944 62 aa4.44□□□□□ -1.7
PHF1-201ENST00000374512 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
PHF1-201ENST00000374512 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
PHF1-201ENST00000374512 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
PHF1-201ENST00000374512 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
PHF1-201ENST00000374512 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
PHF1-201ENST00000374512 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
PHF1-201ENST00000374512 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
PHF1-201ENST00000374512 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
PHF1-201ENST00000374512 LCE1EQ5T753 118 aa3.9□□□□□ -1.78
PHF1-201ENST00000374512 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
PHF1-201ENST00000374512 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
PHF1-201ENST00000374512 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
PHF1-201ENST00000374512 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
PHF1-201ENST00000374512 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
PHF1-201ENST00000374512 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
PHF1-201ENST00000374512 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
PHF1-201ENST00000374512 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
PHF1-201ENST00000374512 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
PHF1-201ENST00000374512 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
PHF1-201ENST00000374512 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
PHF1-201ENST00000374512 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
PHF1-201ENST00000374512 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
PHF1-201ENST00000374512 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
PHF1-201ENST00000374512 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
PHF1-201ENST00000374512 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
PHF1-201ENST00000374512 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
PHF1-201ENST00000374512 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
PHF1-201ENST00000374512 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
PHF1-201ENST00000374512 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
PHF1-201ENST00000374512 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
PHF1-201ENST00000374512 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
PHF1-201ENST00000374512 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 97 ms