RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.56
TMEM50A-201ENST00000374358 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
TMEM50A-201ENST00000374358 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
TMEM50A-201ENST00000374358 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
TMEM50A-201ENST00000374358 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
TMEM50A-201ENST00000374358 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
TMEM50A-201ENST00000374358 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
TMEM50A-201ENST00000374358 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
TMEM50A-201ENST00000374358 MT1GP13640 62 aa5.12□□□□□ -1.59
TMEM50A-201ENST00000374358 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
TMEM50A-201ENST00000374358 MT1MQ8N339 61 aa5.06□□□□□ -1.6
TMEM50A-201ENST00000374358 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
TMEM50A-201ENST00000374358 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
TMEM50A-201ENST00000374358 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
TMEM50A-201ENST00000374358 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
TMEM50A-201ENST00000374358 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
TMEM50A-201ENST00000374358 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
TMEM50A-201ENST00000374358 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
TMEM50A-201ENST00000374358 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
TMEM50A-201ENST00000374358 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
TMEM50A-201ENST00000374358 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
TMEM50A-201ENST00000374358 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
TMEM50A-201ENST00000374358 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
TMEM50A-201ENST00000374358 KRTAP6-3Q3LI67 103 aa4.64□□□□□ -1.67
TMEM50A-201ENST00000374358 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
TMEM50A-201ENST00000374358 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.68
TMEM50A-201ENST00000374358 NEBP20929 6669 aa4.57□□□□□ -1.68
TMEM50A-201ENST00000374358 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
TMEM50A-201ENST00000374358 MT1AP04731 61 aa4.49□□□□□ -1.69
TMEM50A-201ENST00000374358 SPRR2EP22531 72 aa4.48□□□□□ -1.69
TMEM50A-201ENST00000374358 SPRR2BP35325 72 aa4.48□□□□□ -1.69
TMEM50A-201ENST00000374358 SPRR2AP35326 72 aa4.48□□□□□ -1.69
TMEM50A-201ENST00000374358 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
TMEM50A-201ENST00000374358 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
TMEM50A-201ENST00000374358 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
TMEM50A-201ENST00000374358 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
TMEM50A-201ENST00000374358 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
TMEM50A-201ENST00000374358 SPRR2DP22532 72 aa4.28□□□□□ -1.73
TMEM50A-201ENST00000374358 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
TMEM50A-201ENST00000374358 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
TMEM50A-201ENST00000374358 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
TMEM50A-201ENST00000374358 PRM1P04553 51 aa4.16□□□□□ -1.74
TMEM50A-201ENST00000374358 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
TMEM50A-201ENST00000374358 MT3P25713 68 aa4.02□□□□□ -1.77
TMEM50A-201ENST00000374358 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
TMEM50A-201ENST00000374358 MT4P47944 62 aa3.86□□□□□ -1.79
TMEM50A-201ENST00000374358 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
TMEM50A-201ENST00000374358 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
TMEM50A-201ENST00000374358 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
TMEM50A-201ENST00000374358 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
TMEM50A-201ENST00000374358 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
TMEM50A-201ENST00000374358 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
TMEM50A-201ENST00000374358 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
TMEM50A-201ENST00000374358 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
TMEM50A-201ENST00000374358 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
TMEM50A-201ENST00000374358 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
TMEM50A-201ENST00000374358 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
TMEM50A-201ENST00000374358 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
TMEM50A-201ENST00000374358 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
TMEM50A-201ENST00000374358 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
TMEM50A-201ENST00000374358 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
TMEM50A-201ENST00000374358 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
TMEM50A-201ENST00000374358 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
TMEM50A-201ENST00000374358 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
TMEM50A-201ENST00000374358 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
TMEM50A-201ENST00000374358 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
TMEM50A-201ENST00000374358 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
TMEM50A-201ENST00000374358 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.93
TMEM50A-201ENST00000374358 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
TMEM50A-201ENST00000374358 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
TMEM50A-201ENST00000374358 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
TMEM50A-201ENST00000374358 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
TMEM50A-201ENST00000374358 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
TMEM50A-201ENST00000374358 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.98
TMEM50A-201ENST00000374358 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
TMEM50A-201ENST00000374358 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
TMEM50A-201ENST00000374358 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 74.1 ms