RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
SRPK1-204ENST00000373825 MT1LQ93083 61 aa4.87□□□□□ -1.63
SRPK1-204ENST00000373825 SPRR2FQ96RM1 72 aa4.85□□□□□ -1.63
SRPK1-204ENST00000373825 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
SRPK1-204ENST00000373825 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
SRPK1-204ENST00000373825 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
SRPK1-204ENST00000373825 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
SRPK1-204ENST00000373825 MT1EP04732 61 aa4.74□□□□□ -1.65
SRPK1-204ENST00000373825 LCE2BO14633 110 aa4.73□□□□□ -1.65
SRPK1-204ENST00000373825 KMT2DO14686 5537 aa4.71□□□□□ -1.66
SRPK1-204ENST00000373825 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
SRPK1-204ENST00000373825 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
SRPK1-204ENST00000373825 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
SRPK1-204ENST00000373825 USH2AO75445 5202 aa4.53□□□□□ -1.68
SRPK1-204ENST00000373825 MT1MQ8N339 61 aa4.51□□□□□ -1.69
SRPK1-204ENST00000373825 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.69
SRPK1-204ENST00000373825 MUC19Q7Z5P9 8384 aa4.42□□□□□ -1.7
SRPK1-204ENST00000373825 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
SRPK1-204ENST00000373825 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
SRPK1-204ENST00000373825 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
SRPK1-204ENST00000373825 SPRR2EP22531 72 aa4.21□□□□□ -1.74
SRPK1-204ENST00000373825 SPRR2BP35325 72 aa4.21□□□□□ -1.74
SRPK1-204ENST00000373825 SPRR2AP35326 72 aa4.21□□□□□ -1.74
SRPK1-204ENST00000373825 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
SRPK1-204ENST00000373825 MT3P25713 68 aa4.2□□□□□ -1.74
SRPK1-204ENST00000373825 MT1AP04731 61 aa4.17□□□□□ -1.74
SRPK1-204ENST00000373825 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
SRPK1-204ENST00000373825 LCE2AQ5TA79 106 aaPredicted RBP4.14□□□□□ -1.75
SRPK1-204ENST00000373825 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
SRPK1-204ENST00000373825 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
SRPK1-204ENST00000373825 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
SRPK1-204ENST00000373825 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
SRPK1-204ENST00000373825 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
SRPK1-204ENST00000373825 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
SRPK1-204ENST00000373825 SPRR2DP22532 72 aa4□□□□□ -1.77
SRPK1-204ENST00000373825 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
SRPK1-204ENST00000373825 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SRPK1-204ENST00000373825 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
SRPK1-204ENST00000373825 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
SRPK1-204ENST00000373825 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
SRPK1-204ENST00000373825 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
SRPK1-204ENST00000373825 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
SRPK1-204ENST00000373825 MT4P47944 62 aa3.78□□□□□ -1.8
SRPK1-204ENST00000373825 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SRPK1-204ENST00000373825 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
SRPK1-204ENST00000373825 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
SRPK1-204ENST00000373825 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
SRPK1-204ENST00000373825 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
SRPK1-204ENST00000373825 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
SRPK1-204ENST00000373825 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
SRPK1-204ENST00000373825 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
SRPK1-204ENST00000373825 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
SRPK1-204ENST00000373825 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
SRPK1-204ENST00000373825 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
SRPK1-204ENST00000373825 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
SRPK1-204ENST00000373825 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
SRPK1-204ENST00000373825 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
SRPK1-204ENST00000373825 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
SRPK1-204ENST00000373825 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
SRPK1-204ENST00000373825 NEBP20929 6669 aa2.72□□□□□ -1.97
SRPK1-204ENST00000373825 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
SRPK1-204ENST00000373825 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
SRPK1-204ENST00000373825 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
SRPK1-204ENST00000373825 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
SRPK1-204ENST00000373825 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
SRPK1-204ENST00000373825 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
SRPK1-204ENST00000373825 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SRPK1-204ENST00000373825 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
SRPK1-204ENST00000373825 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
SRPK1-204ENST00000373825 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
SRPK1-204ENST00000373825 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
SRPK1-204ENST00000373825 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
SRPK1-204ENST00000373825 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
SRPK1-204ENST00000373825 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
SRPK1-204ENST00000373825 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
SRPK1-204ENST00000373825 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
SRPK1-204ENST00000373825 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 72.1 ms