RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 A0A1B0GU69 56 aa5.55□□□□□ -1.52
HDAC8-202ENST00000373556 H7BZZ5 65 aa5.55□□□□□ -1.52
HDAC8-202ENST00000373556 TNP1P09430 55 aa5.54□□□□□ -1.52
HDAC8-202ENST00000373556 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
HDAC8-202ENST00000373556 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
HDAC8-202ENST00000373556 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
HDAC8-202ENST00000373556 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
HDAC8-202ENST00000373556 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
HDAC8-202ENST00000373556 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
HDAC8-202ENST00000373556 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
HDAC8-202ENST00000373556 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
HDAC8-202ENST00000373556 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
HDAC8-202ENST00000373556 ANAPC13Q9BS18 74 aa5.24□□□□□ -1.57
HDAC8-202ENST00000373556 KRTAP4-12Q9BQ66 201 aa5.21□□□□□ -1.58
HDAC8-202ENST00000373556 LINC01558Q9Y6Z2 57 aa5.2□□□□□ -1.58
HDAC8-202ENST00000373556 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
HDAC8-202ENST00000373556 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
HDAC8-202ENST00000373556 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
HDAC8-202ENST00000373556 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
HDAC8-202ENST00000373556 UQCR11O14957 56 aa5.12□□□□□ -1.59
HDAC8-202ENST00000373556 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
HDAC8-202ENST00000373556 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
HDAC8-202ENST00000373556 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
HDAC8-202ENST00000373556 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
HDAC8-202ENST00000373556 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
HDAC8-202ENST00000373556 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
HDAC8-202ENST00000373556 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
HDAC8-202ENST00000373556 K7ERS5 55 aa4.92□□□□□ -1.62
HDAC8-202ENST00000373556 TMEM258P61165 79 aa4.91□□□□□ -1.62
HDAC8-202ENST00000373556 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
HDAC8-202ENST00000373556 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
HDAC8-202ENST00000373556 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
HDAC8-202ENST00000373556 MT1AP04731 61 aa4.86□□□□□ -1.63
HDAC8-202ENST00000373556 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
HDAC8-202ENST00000373556 PSPHP1O15172 72 aa4.79□□□□□ -1.64
HDAC8-202ENST00000373556 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
HDAC8-202ENST00000373556 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
HDAC8-202ENST00000373556 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
HDAC8-202ENST00000373556 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
HDAC8-202ENST00000373556 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
HDAC8-202ENST00000373556 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
HDAC8-202ENST00000373556 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
HDAC8-202ENST00000373556 V9GYY9 64 aa4.68□□□□□ -1.66
HDAC8-202ENST00000373556 Q1T7F1 81 aa4.66□□□□□ -1.66
HDAC8-202ENST00000373556 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
HDAC8-202ENST00000373556 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
HDAC8-202ENST00000373556 A6NED7 52 aa4.59□□□□□ -1.67
HDAC8-202ENST00000373556 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
HDAC8-202ENST00000373556 ROMO1P60602 79 aa4.56□□□□□ -1.68
HDAC8-202ENST00000373556 KRTAP4-2Q9BYR5 136 aa4.48□□□□□ -1.69
HDAC8-202ENST00000373556 MT3P25713 68 aa4.45□□□□□ -1.7
HDAC8-202ENST00000373556 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
HDAC8-202ENST00000373556 PCP4P48539 62 aa4.34□□□□□ -1.71
HDAC8-202ENST00000373556 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
HDAC8-202ENST00000373556 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
HDAC8-202ENST00000373556 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
HDAC8-202ENST00000373556 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
HDAC8-202ENST00000373556 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
HDAC8-202ENST00000373556 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
HDAC8-202ENST00000373556 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
HDAC8-202ENST00000373556 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
HDAC8-202ENST00000373556 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
HDAC8-202ENST00000373556 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
HDAC8-202ENST00000373556 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
HDAC8-202ENST00000373556 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
HDAC8-202ENST00000373556 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
HDAC8-202ENST00000373556 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
HDAC8-202ENST00000373556 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
HDAC8-202ENST00000373556 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
HDAC8-202ENST00000373556 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
HDAC8-202ENST00000373556 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
HDAC8-202ENST00000373556 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
HDAC8-202ENST00000373556 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
HDAC8-202ENST00000373556 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
HDAC8-202ENST00000373556 PRM1P04553 51 aa2.34□□□□□ -2.03
HDAC8-202ENST00000373556 INE1O15225 51 aa2.08□□□□□ -2.08
HDAC8-202ENST00000373556 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 135.5 ms