RNA–Protein interactions for RNA: ENST00000373017.5

LCN2-203, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene LCN2, Length 848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-203ENST00000373017 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
LCN2-203ENST00000373017 MT4P47944 62 aa5.71□□□□□ -1.5
LCN2-203ENST00000373017 HMCN1Q96RW7 5635 aa5.7□□□□□ -1.5
LCN2-203ENST00000373017 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
LCN2-203ENST00000373017 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
LCN2-203ENST00000373017 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
LCN2-203ENST00000373017 TMEM258P61165 79 aa5.59□□□□□ -1.51
LCN2-203ENST00000373017 UQCR11O14957 56 aa5.58□□□□□ -1.52
LCN2-203ENST00000373017 KRTAP4-6Q9BYQ5 205 aa5.58□□□□□ -1.52
LCN2-203ENST00000373017 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
LCN2-203ENST00000373017 PCP4P48539 62 aa5.47□□□□□ -1.53
LCN2-203ENST00000373017 MIR22HGQ0VDD5 57 aa5.46□□□□□ -1.54
LCN2-203ENST00000373017 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
LCN2-203ENST00000373017 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
LCN2-203ENST00000373017 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
LCN2-203ENST00000373017 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
LCN2-203ENST00000373017 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
LCN2-203ENST00000373017 PSPHP1O15172 72 aa5.35□□□□□ -1.55
LCN2-203ENST00000373017 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
LCN2-203ENST00000373017 K7ERS5 55 aa5.29□□□□□ -1.56
LCN2-203ENST00000373017 Q1T7F1 81 aa5.29□□□□□ -1.56
LCN2-203ENST00000373017 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
LCN2-203ENST00000373017 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
LCN2-203ENST00000373017 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
LCN2-203ENST00000373017 V9GYY9 64 aa5.26□□□□□ -1.57
LCN2-203ENST00000373017 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
LCN2-203ENST00000373017 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
LCN2-203ENST00000373017 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
LCN2-203ENST00000373017 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
LCN2-203ENST00000373017 KRTAP5-7Q6L8G8 165 aa5.2□□□□□ -1.58
LCN2-203ENST00000373017 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
LCN2-203ENST00000373017 A6NED7 52 aa5.12□□□□□ -1.59
LCN2-203ENST00000373017 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
LCN2-203ENST00000373017 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
LCN2-203ENST00000373017 MT1AP04731 61 aa5□□□□□ -1.61
LCN2-203ENST00000373017 ROMO1P60602 79 aa5□□□□□ -1.61
LCN2-203ENST00000373017 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
LCN2-203ENST00000373017 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
LCN2-203ENST00000373017 H3BS24 57 aa4.95□□□□□ -1.62
LCN2-203ENST00000373017 RPS28P62857 69 aaKnown RBP4.89□□□□□ -1.63
LCN2-203ENST00000373017 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
LCN2-203ENST00000373017 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
LCN2-203ENST00000373017 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
LCN2-203ENST00000373017 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
LCN2-203ENST00000373017 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
LCN2-203ENST00000373017 MT3P25713 68 aa4.54□□□□□ -1.68
LCN2-203ENST00000373017 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
LCN2-203ENST00000373017 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
LCN2-203ENST00000373017 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
LCN2-203ENST00000373017 AHNAKQ09666 5890 aaKnown RBP4.48□□□□□ -1.69
LCN2-203ENST00000373017 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
LCN2-203ENST00000373017 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
LCN2-203ENST00000373017 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
LCN2-203ENST00000373017 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
LCN2-203ENST00000373017 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
LCN2-203ENST00000373017 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
LCN2-203ENST00000373017 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
LCN2-203ENST00000373017 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
LCN2-203ENST00000373017 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
LCN2-203ENST00000373017 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
LCN2-203ENST00000373017 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
LCN2-203ENST00000373017 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
LCN2-203ENST00000373017 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
LCN2-203ENST00000373017 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
LCN2-203ENST00000373017 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
LCN2-203ENST00000373017 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
LCN2-203ENST00000373017 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
LCN2-203ENST00000373017 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
LCN2-203ENST00000373017 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
LCN2-203ENST00000373017 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
LCN2-203ENST00000373017 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
LCN2-203ENST00000373017 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
LCN2-203ENST00000373017 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
LCN2-203ENST00000373017 INE1O15225 51 aa2.84□□□□□ -1.95
LCN2-203ENST00000373017 PRM1P04553 51 aa2.59□□□□□ -1.99
LCN2-203ENST00000373017 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
LCN2-203ENST00000373017 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 124.2 ms