RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 MT1GP13640 62 aa7.55□□□□□ -1.2
CCND3-202ENST00000372988 KRTAP12-4P60329 112 aa7.55□□□□□ -1.2
CCND3-202ENST00000372988 MT1MQ8N339 61 aa7.43□□□□□ -1.22
CCND3-202ENST00000372988 LCE2DQ5TA82 110 aaPredicted RBP7.41□□□□□ -1.22
CCND3-202ENST00000372988 KRTAP19-6Q3LI70 58 aa7.36□□□□□ -1.23
CCND3-202ENST00000372988 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
CCND3-202ENST00000372988 CRCT1Q9UGL9 99 aa7.31□□□□□ -1.24
CCND3-202ENST00000372988 FCGBPQ9Y6R7 5405 aaPredicted RBP7.24□□□□□ -1.25
CCND3-202ENST00000372988 MUC12Q9UKN1 5478 aa7.2□□□□□ -1.26
CCND3-202ENST00000372988 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
CCND3-202ENST00000372988 MT1AP04731 61 aa7.06□□□□□ -1.28
CCND3-202ENST00000372988 KRTAP4-9Q9BYQ8 210 aa7.06□□□□□ -1.28
CCND3-202ENST00000372988 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
CCND3-202ENST00000372988 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
CCND3-202ENST00000372988 KRTAP6-1Q3LI64 71 aa6.86□□□□□ -1.31
CCND3-202ENST00000372988 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
CCND3-202ENST00000372988 LCE3DQ9BYE3 92 aa6.85□□□□□ -1.31
CCND3-202ENST00000372988 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.31
CCND3-202ENST00000372988 KRTAP5-5Q701N2 237 aaPredicted RBP6.84□□□□□ -1.31
CCND3-202ENST00000372988 SYNE1Q8NF91 8797 aaKnown RBP6.84□□□□□ -1.32
CCND3-202ENST00000372988 LCE3EQ5T5B0 92 aa6.82□□□□□ -1.32
CCND3-202ENST00000372988 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
CCND3-202ENST00000372988 SPRR2FQ96RM1 72 aa6.77□□□□□ -1.33
CCND3-202ENST00000372988 PRM1P04553 51 aa6.76□□□□□ -1.33
CCND3-202ENST00000372988 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
CCND3-202ENST00000372988 MACF1Q9UPN3 7388 aaKnown RBP6.34□□□□□ -1.39
CCND3-202ENST00000372988 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
CCND3-202ENST00000372988 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
CCND3-202ENST00000372988 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
CCND3-202ENST00000372988 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
CCND3-202ENST00000372988 SYNE2Q8WXH0 6885 aaKnown RBP6.24□□□□□ -1.41
CCND3-202ENST00000372988 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.42
CCND3-202ENST00000372988 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
CCND3-202ENST00000372988 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
CCND3-202ENST00000372988 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
CCND3-202ENST00000372988 MT3P25713 68 aa6.01□□□□□ -1.45
CCND3-202ENST00000372988 SPRR2EP22531 72 aa5.99□□□□□ -1.45
CCND3-202ENST00000372988 SPRR2BP35325 72 aa5.99□□□□□ -1.45
CCND3-202ENST00000372988 SPRR2AP35326 72 aa5.99□□□□□ -1.45
CCND3-202ENST00000372988 SPRR2DP22532 72 aa5.71□□□□□ -1.5
CCND3-202ENST00000372988 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
CCND3-202ENST00000372988 NEBP20929 6669 aa5.49□□□□□ -1.53
CCND3-202ENST00000372988 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
CCND3-202ENST00000372988 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
CCND3-202ENST00000372988 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
CCND3-202ENST00000372988 MUC5ACP98088 5654 aa5.22□□□□□ -1.57
CCND3-202ENST00000372988 KRTAP4-6Q9BYQ5 205 aa5.21□□□□□ -1.58
CCND3-202ENST00000372988 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
CCND3-202ENST00000372988 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
CCND3-202ENST00000372988 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
CCND3-202ENST00000372988 MT4P47944 62 aa5.04□□□□□ -1.6
CCND3-202ENST00000372988 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
CCND3-202ENST00000372988 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
CCND3-202ENST00000372988 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
CCND3-202ENST00000372988 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
CCND3-202ENST00000372988 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
CCND3-202ENST00000372988 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
CCND3-202ENST00000372988 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
CCND3-202ENST00000372988 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
CCND3-202ENST00000372988 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
CCND3-202ENST00000372988 KRTAP21-2Q3LI59 83 aa4.42□□□□□ -1.7
CCND3-202ENST00000372988 KRTAP21-1Q3LI58 79 aa4.36□□□□□ -1.71
CCND3-202ENST00000372988 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
CCND3-202ENST00000372988 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
CCND3-202ENST00000372988 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
CCND3-202ENST00000372988 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
CCND3-202ENST00000372988 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
CCND3-202ENST00000372988 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
CCND3-202ENST00000372988 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
CCND3-202ENST00000372988 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
CCND3-202ENST00000372988 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
CCND3-202ENST00000372988 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
CCND3-202ENST00000372988 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
CCND3-202ENST00000372988 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
CCND3-202ENST00000372988 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
CCND3-202ENST00000372988 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
CCND3-202ENST00000372988 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 75 ms