RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
SYNPO2L-201ENST00000372873 LCE2DQ5TA82 110 aaPredicted RBP3.7□□□□□ -1.82
SYNPO2L-201ENST00000372873 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
SYNPO2L-201ENST00000372873 MT1GP13640 62 aa3.67□□□□□ -1.82
SYNPO2L-201ENST00000372873 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
SYNPO2L-201ENST00000372873 LCE2AQ5TA79 106 aaPredicted RBP3.63□□□□□ -1.83
SYNPO2L-201ENST00000372873 MT1LQ93083 61 aa3.58□□□□□ -1.84
SYNPO2L-201ENST00000372873 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
SYNPO2L-201ENST00000372873 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
SYNPO2L-201ENST00000372873 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
SYNPO2L-201ENST00000372873 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
SYNPO2L-201ENST00000372873 PRM1P04553 51 aa3.53□□□□□ -1.84
SYNPO2L-201ENST00000372873 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
SYNPO2L-201ENST00000372873 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
SYNPO2L-201ENST00000372873 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
SYNPO2L-201ENST00000372873 MT1EP04732 61 aa3.49□□□□□ -1.85
SYNPO2L-201ENST00000372873 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
SYNPO2L-201ENST00000372873 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
SYNPO2L-201ENST00000372873 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
SYNPO2L-201ENST00000372873 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
SYNPO2L-201ENST00000372873 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
SYNPO2L-201ENST00000372873 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
SYNPO2L-201ENST00000372873 MT1MQ8N339 61 aa3.31□□□□□ -1.88
SYNPO2L-201ENST00000372873 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
SYNPO2L-201ENST00000372873 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
SYNPO2L-201ENST00000372873 SPRR2EP22531 72 aa3.24□□□□□ -1.89
SYNPO2L-201ENST00000372873 SPRR2BP35325 72 aa3.24□□□□□ -1.89
SYNPO2L-201ENST00000372873 SPRR2AP35326 72 aa3.24□□□□□ -1.89
SYNPO2L-201ENST00000372873 MT3P25713 68 aa3.21□□□□□ -1.9
SYNPO2L-201ENST00000372873 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
SYNPO2L-201ENST00000372873 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
SYNPO2L-201ENST00000372873 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
SYNPO2L-201ENST00000372873 SPRR2DP22532 72 aa3.16□□□□□ -1.9
SYNPO2L-201ENST00000372873 MT1AP04731 61 aa3.15□□□□□ -1.91
SYNPO2L-201ENST00000372873 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
SYNPO2L-201ENST00000372873 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
SYNPO2L-201ENST00000372873 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
SYNPO2L-201ENST00000372873 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
SYNPO2L-201ENST00000372873 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
SYNPO2L-201ENST00000372873 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
SYNPO2L-201ENST00000372873 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
SYNPO2L-201ENST00000372873 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
SYNPO2L-201ENST00000372873 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
SYNPO2L-201ENST00000372873 MT4P47944 62 aa2.8□□□□□ -1.96
SYNPO2L-201ENST00000372873 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
SYNPO2L-201ENST00000372873 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
SYNPO2L-201ENST00000372873 LCE4AQ5TA78 99 aa2.76□□□□□ -1.97
SYNPO2L-201ENST00000372873 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
SYNPO2L-201ENST00000372873 NEBP20929 6669 aa2.71□□□□□ -1.97
SYNPO2L-201ENST00000372873 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
SYNPO2L-201ENST00000372873 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
SYNPO2L-201ENST00000372873 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
SYNPO2L-201ENST00000372873 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
SYNPO2L-201ENST00000372873 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
SYNPO2L-201ENST00000372873 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
SYNPO2L-201ENST00000372873 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
SYNPO2L-201ENST00000372873 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
SYNPO2L-201ENST00000372873 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
SYNPO2L-201ENST00000372873 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
SYNPO2L-201ENST00000372873 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
SYNPO2L-201ENST00000372873 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
SYNPO2L-201ENST00000372873 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
SYNPO2L-201ENST00000372873 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
SYNPO2L-201ENST00000372873 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
SYNPO2L-201ENST00000372873 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
SYNPO2L-201ENST00000372873 KRTAP4-12Q9BQ66 201 aa1.99□□□□□ -2.09
SYNPO2L-201ENST00000372873 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
SYNPO2L-201ENST00000372873 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
SYNPO2L-201ENST00000372873 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
SYNPO2L-201ENST00000372873 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
SYNPO2L-201ENST00000372873 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
SYNPO2L-201ENST00000372873 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
SYNPO2L-201ENST00000372873 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SYNPO2L-201ENST00000372873 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
SYNPO2L-201ENST00000372873 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
SYNPO2L-201ENST00000372873 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
SYNPO2L-201ENST00000372873 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 42.6 ms