RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 MT1EP04732 61 aa5.38□□□□□ -1.55
PABPC4-201ENST00000372856 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.55
PABPC4-201ENST00000372856 CRCT1Q9UGL9 99 aa5.29□□□□□ -1.56
PABPC4-201ENST00000372856 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
PABPC4-201ENST00000372856 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
PABPC4-201ENST00000372856 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
PABPC4-201ENST00000372856 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
PABPC4-201ENST00000372856 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
PABPC4-201ENST00000372856 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
PABPC4-201ENST00000372856 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
PABPC4-201ENST00000372856 MT1GP13640 62 aa5.12□□□□□ -1.59
PABPC4-201ENST00000372856 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
PABPC4-201ENST00000372856 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
PABPC4-201ENST00000372856 MT1MQ8N339 61 aa5.03□□□□□ -1.6
PABPC4-201ENST00000372856 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
PABPC4-201ENST00000372856 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
PABPC4-201ENST00000372856 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
PABPC4-201ENST00000372856 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
PABPC4-201ENST00000372856 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
PABPC4-201ENST00000372856 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
PABPC4-201ENST00000372856 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
PABPC4-201ENST00000372856 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
PABPC4-201ENST00000372856 PRM1P04553 51 aa4.71□□□□□ -1.66
PABPC4-201ENST00000372856 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
PABPC4-201ENST00000372856 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
PABPC4-201ENST00000372856 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
PABPC4-201ENST00000372856 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
PABPC4-201ENST00000372856 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
PABPC4-201ENST00000372856 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
PABPC4-201ENST00000372856 MT1AP04731 61 aa4.53□□□□□ -1.68
PABPC4-201ENST00000372856 KRTAP9-6A0A140TA67 174 aa4.53□□□□□ -1.68
PABPC4-201ENST00000372856 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
PABPC4-201ENST00000372856 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
PABPC4-201ENST00000372856 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
PABPC4-201ENST00000372856 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
PABPC4-201ENST00000372856 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
PABPC4-201ENST00000372856 SPRR2EP22531 72 aa4.38□□□□□ -1.71
PABPC4-201ENST00000372856 SPRR2BP35325 72 aa4.38□□□□□ -1.71
PABPC4-201ENST00000372856 SPRR2AP35326 72 aa4.38□□□□□ -1.71
PABPC4-201ENST00000372856 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
PABPC4-201ENST00000372856 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
PABPC4-201ENST00000372856 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
PABPC4-201ENST00000372856 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
PABPC4-201ENST00000372856 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
PABPC4-201ENST00000372856 SPRR2DP22532 72 aa4.15□□□□□ -1.74
PABPC4-201ENST00000372856 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
PABPC4-201ENST00000372856 MT3P25713 68 aa4.05□□□□□ -1.76
PABPC4-201ENST00000372856 NEBP20929 6669 aa3.91□□□□□ -1.78
PABPC4-201ENST00000372856 MT4P47944 62 aa3.9□□□□□ -1.78
PABPC4-201ENST00000372856 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
PABPC4-201ENST00000372856 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
PABPC4-201ENST00000372856 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
PABPC4-201ENST00000372856 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
PABPC4-201ENST00000372856 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
PABPC4-201ENST00000372856 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
PABPC4-201ENST00000372856 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
PABPC4-201ENST00000372856 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
PABPC4-201ENST00000372856 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
PABPC4-201ENST00000372856 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
PABPC4-201ENST00000372856 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
PABPC4-201ENST00000372856 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
PABPC4-201ENST00000372856 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
PABPC4-201ENST00000372856 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
PABPC4-201ENST00000372856 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
PABPC4-201ENST00000372856 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
PABPC4-201ENST00000372856 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
PABPC4-201ENST00000372856 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
PABPC4-201ENST00000372856 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
PABPC4-201ENST00000372856 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
PABPC4-201ENST00000372856 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
PABPC4-201ENST00000372856 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
PABPC4-201ENST00000372856 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
PABPC4-201ENST00000372856 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
PABPC4-201ENST00000372856 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
PABPC4-201ENST00000372856 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
PABPC4-201ENST00000372856 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
PABPC4-201ENST00000372856 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms