RNA–Protein interactions for RNA: ENST00000372597.5

SCMH1-207, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,252 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-207ENST00000372597 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
SCMH1-207ENST00000372597 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
SCMH1-207ENST00000372597 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
SCMH1-207ENST00000372597 MT1GP13640 62 aa3.5□□□□□ -1.85
SCMH1-207ENST00000372597 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
SCMH1-207ENST00000372597 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
SCMH1-207ENST00000372597 MT1MQ8N339 61 aa3.41□□□□□ -1.86
SCMH1-207ENST00000372597 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
SCMH1-207ENST00000372597 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
SCMH1-207ENST00000372597 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.87
SCMH1-207ENST00000372597 LCE2DQ5TA82 110 aaPredicted RBP3.4□□□□□ -1.87
SCMH1-207ENST00000372597 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
SCMH1-207ENST00000372597 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
SCMH1-207ENST00000372597 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
SCMH1-207ENST00000372597 LCE3BQ5TA77 95 aa3.29□□□□□ -1.88
SCMH1-207ENST00000372597 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
SCMH1-207ENST00000372597 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
SCMH1-207ENST00000372597 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
SCMH1-207ENST00000372597 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
SCMH1-207ENST00000372597 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
SCMH1-207ENST00000372597 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
SCMH1-207ENST00000372597 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
SCMH1-207ENST00000372597 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
SCMH1-207ENST00000372597 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.92
SCMH1-207ENST00000372597 MT1AP04731 61 aa3.06□□□□□ -1.92
SCMH1-207ENST00000372597 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
SCMH1-207ENST00000372597 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
SCMH1-207ENST00000372597 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
SCMH1-207ENST00000372597 SPRR2EP22531 72 aa3.01□□□□□ -1.93
SCMH1-207ENST00000372597 SPRR2BP35325 72 aa3.01□□□□□ -1.93
SCMH1-207ENST00000372597 SPRR2AP35326 72 aa3.01□□□□□ -1.93
SCMH1-207ENST00000372597 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
SCMH1-207ENST00000372597 PRM1P04553 51 aa2.95□□□□□ -1.94
SCMH1-207ENST00000372597 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
SCMH1-207ENST00000372597 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
SCMH1-207ENST00000372597 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
SCMH1-207ENST00000372597 SPRR2DP22532 72 aa2.87□□□□□ -1.95
SCMH1-207ENST00000372597 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
SCMH1-207ENST00000372597 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
SCMH1-207ENST00000372597 MT3P25713 68 aa2.8□□□□□ -1.96
SCMH1-207ENST00000372597 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
SCMH1-207ENST00000372597 NEBP20929 6669 aa2.7□□□□□ -1.98
SCMH1-207ENST00000372597 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -1.99
SCMH1-207ENST00000372597 MT4P47944 62 aa2.58□□□□□ -2
SCMH1-207ENST00000372597 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
SCMH1-207ENST00000372597 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
SCMH1-207ENST00000372597 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
SCMH1-207ENST00000372597 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
SCMH1-207ENST00000372597 LCE1DQ5T752 114 aa2.42□□□□□ -2.02
SCMH1-207ENST00000372597 LCE4AQ5TA78 99 aa2.41□□□□□ -2.02
SCMH1-207ENST00000372597 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
SCMH1-207ENST00000372597 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
SCMH1-207ENST00000372597 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
SCMH1-207ENST00000372597 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
SCMH1-207ENST00000372597 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
SCMH1-207ENST00000372597 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
SCMH1-207ENST00000372597 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
SCMH1-207ENST00000372597 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
SCMH1-207ENST00000372597 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
SCMH1-207ENST00000372597 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
SCMH1-207ENST00000372597 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SCMH1-207ENST00000372597 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
SCMH1-207ENST00000372597 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
SCMH1-207ENST00000372597 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
SCMH1-207ENST00000372597 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
SCMH1-207ENST00000372597 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
SCMH1-207ENST00000372597 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
SCMH1-207ENST00000372597 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SCMH1-207ENST00000372597 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
SCMH1-207ENST00000372597 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
SCMH1-207ENST00000372597 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
SCMH1-207ENST00000372597 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
SCMH1-207ENST00000372597 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
SCMH1-207ENST00000372597 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SCMH1-207ENST00000372597 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
SCMH1-207ENST00000372597 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
SCMH1-207ENST00000372597 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 381.3 ms