RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
CTSA-204ENST00000372484 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
CTSA-204ENST00000372484 MT1GP13640 62 aa6.01□□□□□ -1.45
CTSA-204ENST00000372484 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
CTSA-204ENST00000372484 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
CTSA-204ENST00000372484 MT1MQ8N339 61 aa5.98□□□□□ -1.45
CTSA-204ENST00000372484 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
CTSA-204ENST00000372484 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
CTSA-204ENST00000372484 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
CTSA-204ENST00000372484 SYNE2Q8WXH0 6885 aaKnown RBP5.82□□□□□ -1.48
CTSA-204ENST00000372484 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
CTSA-204ENST00000372484 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
CTSA-204ENST00000372484 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
CTSA-204ENST00000372484 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
CTSA-204ENST00000372484 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
CTSA-204ENST00000372484 INE1O15225 51 aa5.67□□□□□ -1.5
CTSA-204ENST00000372484 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
CTSA-204ENST00000372484 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
CTSA-204ENST00000372484 SPRR2EP22531 72 aa5.6□□□□□ -1.51
CTSA-204ENST00000372484 SPRR2BP35325 72 aa5.6□□□□□ -1.51
CTSA-204ENST00000372484 SPRR2AP35326 72 aa5.6□□□□□ -1.51
CTSA-204ENST00000372484 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
CTSA-204ENST00000372484 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
CTSA-204ENST00000372484 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
CTSA-204ENST00000372484 SPRR2DP22532 72 aa5.38□□□□□ -1.55
CTSA-204ENST00000372484 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
CTSA-204ENST00000372484 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
CTSA-204ENST00000372484 MT1AP04731 61 aa5.32□□□□□ -1.56
CTSA-204ENST00000372484 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
CTSA-204ENST00000372484 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
CTSA-204ENST00000372484 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
CTSA-204ENST00000372484 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
CTSA-204ENST00000372484 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
CTSA-204ENST00000372484 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
CTSA-204ENST00000372484 NEBP20929 6669 aa5.02□□□□□ -1.61
CTSA-204ENST00000372484 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
CTSA-204ENST00000372484 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
CTSA-204ENST00000372484 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
CTSA-204ENST00000372484 MT3P25713 68 aa4.81□□□□□ -1.64
CTSA-204ENST00000372484 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
CTSA-204ENST00000372484 MT4P47944 62 aa4.7□□□□□ -1.66
CTSA-204ENST00000372484 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
CTSA-204ENST00000372484 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
CTSA-204ENST00000372484 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
CTSA-204ENST00000372484 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
CTSA-204ENST00000372484 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
CTSA-204ENST00000372484 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
CTSA-204ENST00000372484 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
CTSA-204ENST00000372484 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
CTSA-204ENST00000372484 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
CTSA-204ENST00000372484 PRM1P04553 51 aa4.39□□□□□ -1.71
CTSA-204ENST00000372484 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
CTSA-204ENST00000372484 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CTSA-204ENST00000372484 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
CTSA-204ENST00000372484 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
CTSA-204ENST00000372484 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
CTSA-204ENST00000372484 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
CTSA-204ENST00000372484 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
CTSA-204ENST00000372484 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
CTSA-204ENST00000372484 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
CTSA-204ENST00000372484 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
CTSA-204ENST00000372484 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
CTSA-204ENST00000372484 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
CTSA-204ENST00000372484 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CTSA-204ENST00000372484 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
CTSA-204ENST00000372484 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
CTSA-204ENST00000372484 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
CTSA-204ENST00000372484 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
CTSA-204ENST00000372484 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CTSA-204ENST00000372484 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
CTSA-204ENST00000372484 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
CTSA-204ENST00000372484 LCE1FQ5T754 118 aa2.9□□□□□ -1.94
CTSA-204ENST00000372484 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
CTSA-204ENST00000372484 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
CTSA-204ENST00000372484 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
CTSA-204ENST00000372484 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
CTSA-204ENST00000372484 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 31.2 ms