RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
CD40-201ENST00000372276 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
CD40-201ENST00000372276 MT1EP04732 61 aa6.35□□□□□ -1.39
CD40-201ENST00000372276 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
CD40-201ENST00000372276 MT1LQ93083 61 aa6.32□□□□□ -1.4
CD40-201ENST00000372276 KRTAP6-3Q3LI67 103 aa6.28□□□□□ -1.4
CD40-201ENST00000372276 KMT2DO14686 5537 aa6.27□□□□□ -1.41
CD40-201ENST00000372276 KRTAP9-6A8MVA2 160 aa6.18□□□□□ -1.42
CD40-201ENST00000372276 KRTAP5-9P26371 169 aa6.12□□□□□ -1.43
CD40-201ENST00000372276 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
CD40-201ENST00000372276 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
CD40-201ENST00000372276 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
CD40-201ENST00000372276 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
CD40-201ENST00000372276 MT1GP13640 62 aa6.05□□□□□ -1.44
CD40-201ENST00000372276 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
CD40-201ENST00000372276 MUC12Q9UKN1 5478 aa6□□□□□ -1.45
CD40-201ENST00000372276 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
CD40-201ENST00000372276 MT1MQ8N339 61 aa5.94□□□□□ -1.46
CD40-201ENST00000372276 NEBP20929 6669 aa5.92□□□□□ -1.46
CD40-201ENST00000372276 MDN1Q9NU22 5596 aa5.89□□□□□ -1.47
CD40-201ENST00000372276 SPRR2EP22531 72 aa5.81□□□□□ -1.48
CD40-201ENST00000372276 SPRR2BP35325 72 aa5.81□□□□□ -1.48
CD40-201ENST00000372276 SPRR2AP35326 72 aa5.81□□□□□ -1.48
CD40-201ENST00000372276 LCE5AQ5TCM9 118 aa5.81□□□□□ -1.48
CD40-201ENST00000372276 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
CD40-201ENST00000372276 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
CD40-201ENST00000372276 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
CD40-201ENST00000372276 SPRR2DP22532 72 aa5.62□□□□□ -1.51
CD40-201ENST00000372276 KRTAP5-3Q6L8H2 238 aa5.51□□□□□ -1.53
CD40-201ENST00000372276 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
CD40-201ENST00000372276 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
CD40-201ENST00000372276 MT1AP04731 61 aa5.39□□□□□ -1.55
CD40-201ENST00000372276 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
CD40-201ENST00000372276 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
CD40-201ENST00000372276 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
CD40-201ENST00000372276 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
CD40-201ENST00000372276 LCE3DQ9BYE3 92 aa5.1□□□□□ -1.59
CD40-201ENST00000372276 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
CD40-201ENST00000372276 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
CD40-201ENST00000372276 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
CD40-201ENST00000372276 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
CD40-201ENST00000372276 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
CD40-201ENST00000372276 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.61
CD40-201ENST00000372276 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
CD40-201ENST00000372276 MT3P25713 68 aa4.9□□□□□ -1.63
CD40-201ENST00000372276 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.63
CD40-201ENST00000372276 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
CD40-201ENST00000372276 MT4P47944 62 aa4.88□□□□□ -1.63
CD40-201ENST00000372276 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
CD40-201ENST00000372276 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
CD40-201ENST00000372276 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
CD40-201ENST00000372276 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
CD40-201ENST00000372276 PRM1P04553 51 aa4.61□□□□□ -1.67
CD40-201ENST00000372276 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
CD40-201ENST00000372276 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
CD40-201ENST00000372276 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
CD40-201ENST00000372276 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
CD40-201ENST00000372276 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
CD40-201ENST00000372276 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
CD40-201ENST00000372276 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
CD40-201ENST00000372276 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
CD40-201ENST00000372276 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
CD40-201ENST00000372276 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
CD40-201ENST00000372276 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
CD40-201ENST00000372276 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
CD40-201ENST00000372276 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
CD40-201ENST00000372276 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
CD40-201ENST00000372276 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
CD40-201ENST00000372276 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
CD40-201ENST00000372276 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
CD40-201ENST00000372276 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
CD40-201ENST00000372276 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
CD40-201ENST00000372276 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CD40-201ENST00000372276 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
CD40-201ENST00000372276 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
CD40-201ENST00000372276 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CD40-201ENST00000372276 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 85.4 ms