RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 TMEM258P61165 79 aa6.57□□□□□ -1.36
TMEM53-201ENST00000372235 PCP4P48539 62 aa6.56□□□□□ -1.36
TMEM53-201ENST00000372235 GPR98Q8WXG9 6306 aa6.54□□□□□ -1.36
TMEM53-201ENST00000372235 MT4P47944 62 aa6.49□□□□□ -1.37
TMEM53-201ENST00000372235 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
TMEM53-201ENST00000372235 KRTAP5-4Q6L8H1 288 aa6.45□□□□□ -1.38
TMEM53-201ENST00000372235 K7ERS5 55 aa6.43□□□□□ -1.38
TMEM53-201ENST00000372235 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
TMEM53-201ENST00000372235 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
TMEM53-201ENST00000372235 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
TMEM53-201ENST00000372235 HMCN1Q96RW7 5635 aa6.39□□□□□ -1.39
TMEM53-201ENST00000372235 V9GYY9 64 aa6.34□□□□□ -1.39
TMEM53-201ENST00000372235 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
TMEM53-201ENST00000372235 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
TMEM53-201ENST00000372235 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
TMEM53-201ENST00000372235 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
TMEM53-201ENST00000372235 Q1T7F1 81 aa6.18□□□□□ -1.42
TMEM53-201ENST00000372235 PSPHP1O15172 72 aa6.16□□□□□ -1.42
TMEM53-201ENST00000372235 AHNAK2Q8IVF2 5795 aa6.15□□□□□ -1.42
TMEM53-201ENST00000372235 KRTAP5-10Q6L8G5 202 aa6.15□□□□□ -1.42
TMEM53-201ENST00000372235 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
TMEM53-201ENST00000372235 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
TMEM53-201ENST00000372235 KRTAP12-4P60329 112 aa6.12□□□□□ -1.43
TMEM53-201ENST00000372235 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
TMEM53-201ENST00000372235 KRTAP20-2Q3LI61 65 aa6.08□□□□□ -1.44
TMEM53-201ENST00000372235 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
TMEM53-201ENST00000372235 A6NED7 52 aa6.02□□□□□ -1.45
TMEM53-201ENST00000372235 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
TMEM53-201ENST00000372235 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
TMEM53-201ENST00000372235 KRTAP5-7Q6L8G8 165 aa5.97□□□□□ -1.45
TMEM53-201ENST00000372235 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
TMEM53-201ENST00000372235 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
TMEM53-201ENST00000372235 ROMO1P60602 79 aa5.86□□□□□ -1.47
TMEM53-201ENST00000372235 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
TMEM53-201ENST00000372235 MT1AP04731 61 aa5.73□□□□□ -1.49
TMEM53-201ENST00000372235 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
TMEM53-201ENST00000372235 KRTAP5-2Q701N4 177 aa5.63□□□□□ -1.51
TMEM53-201ENST00000372235 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
TMEM53-201ENST00000372235 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
TMEM53-201ENST00000372235 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
TMEM53-201ENST00000372235 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
TMEM53-201ENST00000372235 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
TMEM53-201ENST00000372235 KRTAP5-8O75690 187 aa5.37□□□□□ -1.55
TMEM53-201ENST00000372235 MT3P25713 68 aa5.3□□□□□ -1.56
TMEM53-201ENST00000372235 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
TMEM53-201ENST00000372235 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
TMEM53-201ENST00000372235 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
TMEM53-201ENST00000372235 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
TMEM53-201ENST00000372235 MUC5ACP98088 5654 aa5.09□□□□□ -1.59
TMEM53-201ENST00000372235 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
TMEM53-201ENST00000372235 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
TMEM53-201ENST00000372235 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
TMEM53-201ENST00000372235 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
TMEM53-201ENST00000372235 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
TMEM53-201ENST00000372235 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
TMEM53-201ENST00000372235 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
TMEM53-201ENST00000372235 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
TMEM53-201ENST00000372235 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
TMEM53-201ENST00000372235 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
TMEM53-201ENST00000372235 H3BS24 57 aa4.46□□□□□ -1.7
TMEM53-201ENST00000372235 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
TMEM53-201ENST00000372235 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
TMEM53-201ENST00000372235 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
TMEM53-201ENST00000372235 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
TMEM53-201ENST00000372235 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
TMEM53-201ENST00000372235 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
TMEM53-201ENST00000372235 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
TMEM53-201ENST00000372235 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
TMEM53-201ENST00000372235 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
TMEM53-201ENST00000372235 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
TMEM53-201ENST00000372235 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
TMEM53-201ENST00000372235 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
TMEM53-201ENST00000372235 INE1O15225 51 aa3.18□□□□□ -1.9
TMEM53-201ENST00000372235 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
TMEM53-201ENST00000372235 PRM1P04553 51 aa2.93□□□□□ -1.94
TMEM53-201ENST00000372235 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
TMEM53-201ENST00000372235 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 54.2 ms