RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
GTF3C5-204ENST00000372108 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
GTF3C5-204ENST00000372108 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
GTF3C5-204ENST00000372108 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
GTF3C5-204ENST00000372108 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
GTF3C5-204ENST00000372108 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
GTF3C5-204ENST00000372108 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
GTF3C5-204ENST00000372108 MT1GP13640 62 aa5.32□□□□□ -1.56
GTF3C5-204ENST00000372108 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
GTF3C5-204ENST00000372108 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
GTF3C5-204ENST00000372108 MT1MQ8N339 61 aa5.28□□□□□ -1.56
GTF3C5-204ENST00000372108 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
GTF3C5-204ENST00000372108 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
GTF3C5-204ENST00000372108 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.57
GTF3C5-204ENST00000372108 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
GTF3C5-204ENST00000372108 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
GTF3C5-204ENST00000372108 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
GTF3C5-204ENST00000372108 SPRR2EP22531 72 aa5.15□□□□□ -1.59
GTF3C5-204ENST00000372108 SPRR2BP35325 72 aa5.15□□□□□ -1.59
GTF3C5-204ENST00000372108 SPRR2AP35326 72 aa5.15□□□□□ -1.59
GTF3C5-204ENST00000372108 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
GTF3C5-204ENST00000372108 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
GTF3C5-204ENST00000372108 SPRR2DP22532 72 aa4.96□□□□□ -1.62
GTF3C5-204ENST00000372108 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
GTF3C5-204ENST00000372108 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
GTF3C5-204ENST00000372108 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.63
GTF3C5-204ENST00000372108 NEBP20929 6669 aa4.87□□□□□ -1.63
GTF3C5-204ENST00000372108 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
GTF3C5-204ENST00000372108 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
GTF3C5-204ENST00000372108 MT1AP04731 61 aa4.67□□□□□ -1.66
GTF3C5-204ENST00000372108 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
GTF3C5-204ENST00000372108 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
GTF3C5-204ENST00000372108 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
GTF3C5-204ENST00000372108 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
GTF3C5-204ENST00000372108 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
GTF3C5-204ENST00000372108 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
GTF3C5-204ENST00000372108 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
GTF3C5-204ENST00000372108 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
GTF3C5-204ENST00000372108 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
GTF3C5-204ENST00000372108 MT4P47944 62 aa4.34□□□□□ -1.71
GTF3C5-204ENST00000372108 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
GTF3C5-204ENST00000372108 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
GTF3C5-204ENST00000372108 MT3P25713 68 aa4.22□□□□□ -1.73
GTF3C5-204ENST00000372108 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
GTF3C5-204ENST00000372108 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
GTF3C5-204ENST00000372108 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
GTF3C5-204ENST00000372108 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
GTF3C5-204ENST00000372108 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
GTF3C5-204ENST00000372108 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
GTF3C5-204ENST00000372108 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
GTF3C5-204ENST00000372108 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
GTF3C5-204ENST00000372108 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
GTF3C5-204ENST00000372108 PRM1P04553 51 aa3.86□□□□□ -1.79
GTF3C5-204ENST00000372108 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
GTF3C5-204ENST00000372108 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
GTF3C5-204ENST00000372108 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
GTF3C5-204ENST00000372108 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
GTF3C5-204ENST00000372108 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
GTF3C5-204ENST00000372108 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
GTF3C5-204ENST00000372108 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
GTF3C5-204ENST00000372108 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
GTF3C5-204ENST00000372108 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
GTF3C5-204ENST00000372108 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
GTF3C5-204ENST00000372108 LCE1CQ5T751 118 aa3.4□□□□□ -1.86
GTF3C5-204ENST00000372108 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
GTF3C5-204ENST00000372108 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
GTF3C5-204ENST00000372108 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
GTF3C5-204ENST00000372108 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
GTF3C5-204ENST00000372108 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
GTF3C5-204ENST00000372108 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
GTF3C5-204ENST00000372108 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
GTF3C5-204ENST00000372108 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
GTF3C5-204ENST00000372108 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
GTF3C5-204ENST00000372108 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
GTF3C5-204ENST00000372108 PHGR1C9JFL3 82 aa2.57□□□□□ -2
GTF3C5-204ENST00000372108 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
GTF3C5-204ENST00000372108 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms