RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
VEGFA-206ENST00000372077 KRTAP6-3Q3LI67 103 aa6.69□□□□□ -1.34
VEGFA-206ENST00000372077 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
VEGFA-206ENST00000372077 KRTAP9-7A8MTY7 169 aa6.56□□□□□ -1.36
VEGFA-206ENST00000372077 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
VEGFA-206ENST00000372077 MT1LQ93083 61 aa6.55□□□□□ -1.36
VEGFA-206ENST00000372077 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
VEGFA-206ENST00000372077 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
VEGFA-206ENST00000372077 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
VEGFA-206ENST00000372077 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
VEGFA-206ENST00000372077 MT1GP13640 62 aa6.42□□□□□ -1.38
VEGFA-206ENST00000372077 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
VEGFA-206ENST00000372077 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
VEGFA-206ENST00000372077 SPRR2EP22531 72 aa6.4□□□□□ -1.38
VEGFA-206ENST00000372077 SPRR2BP35325 72 aa6.4□□□□□ -1.38
VEGFA-206ENST00000372077 SPRR2AP35326 72 aa6.4□□□□□ -1.38
VEGFA-206ENST00000372077 KRTAP9-6A8MVA2 160 aa6.39□□□□□ -1.39
VEGFA-206ENST00000372077 DSTQ03001 7570 aaKnown RBP6.36□□□□□ -1.39
VEGFA-206ENST00000372077 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
VEGFA-206ENST00000372077 MT1MQ8N339 61 aa6.33□□□□□ -1.4
VEGFA-206ENST00000372077 NEBP20929 6669 aa6.21□□□□□ -1.42
VEGFA-206ENST00000372077 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
VEGFA-206ENST00000372077 SPRR2DP22532 72 aa6.17□□□□□ -1.42
VEGFA-206ENST00000372077 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
VEGFA-206ENST00000372077 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
VEGFA-206ENST00000372077 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
VEGFA-206ENST00000372077 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
VEGFA-206ENST00000372077 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
VEGFA-206ENST00000372077 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
VEGFA-206ENST00000372077 OBSCNQ5VST9 7968 aa5.85□□□□□ -1.47
VEGFA-206ENST00000372077 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
VEGFA-206ENST00000372077 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
VEGFA-206ENST00000372077 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
VEGFA-206ENST00000372077 KRTAP4-6Q9BYQ5 205 aa5.63□□□□□ -1.51
VEGFA-206ENST00000372077 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
VEGFA-206ENST00000372077 MT1AP04731 61 aa5.58□□□□□ -1.52
VEGFA-206ENST00000372077 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
VEGFA-206ENST00000372077 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
VEGFA-206ENST00000372077 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
VEGFA-206ENST00000372077 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
VEGFA-206ENST00000372077 MT4P47944 62 aa5.35□□□□□ -1.55
VEGFA-206ENST00000372077 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
VEGFA-206ENST00000372077 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
VEGFA-206ENST00000372077 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
VEGFA-206ENST00000372077 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
VEGFA-206ENST00000372077 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
VEGFA-206ENST00000372077 MT3P25713 68 aa5.05□□□□□ -1.6
VEGFA-206ENST00000372077 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
VEGFA-206ENST00000372077 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
VEGFA-206ENST00000372077 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
VEGFA-206ENST00000372077 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
VEGFA-206ENST00000372077 PRM1P04553 51 aa4.87□□□□□ -1.63
VEGFA-206ENST00000372077 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
VEGFA-206ENST00000372077 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
VEGFA-206ENST00000372077 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
VEGFA-206ENST00000372077 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
VEGFA-206ENST00000372077 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
VEGFA-206ENST00000372077 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
VEGFA-206ENST00000372077 KRTAP5-8O75690 187 aa4.4□□□□□ -1.7
VEGFA-206ENST00000372077 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
VEGFA-206ENST00000372077 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
VEGFA-206ENST00000372077 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.72
VEGFA-206ENST00000372077 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
VEGFA-206ENST00000372077 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
VEGFA-206ENST00000372077 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
VEGFA-206ENST00000372077 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
VEGFA-206ENST00000372077 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
VEGFA-206ENST00000372077 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
VEGFA-206ENST00000372077 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
VEGFA-206ENST00000372077 MUC19Q7Z5P9 8384 aa3.7□□□□□ -1.82
VEGFA-206ENST00000372077 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
VEGFA-206ENST00000372077 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
VEGFA-206ENST00000372077 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
VEGFA-206ENST00000372077 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
VEGFA-206ENST00000372077 PHGR1C9JFL3 82 aa3.15□□□□□ -1.9
VEGFA-206ENST00000372077 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.92
VEGFA-206ENST00000372077 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 62.1 ms