RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
LRRC42-202ENST00000371368 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
LRRC42-202ENST00000371368 MT4P47944 62 aa5.92□□□□□ -1.46
LRRC42-202ENST00000371368 KRTAP5-4Q6L8H1 288 aa5.84□□□□□ -1.47
LRRC42-202ENST00000371368 UQCR11O14957 56 aa5.82□□□□□ -1.48
LRRC42-202ENST00000371368 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
LRRC42-202ENST00000371368 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
LRRC42-202ENST00000371368 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
LRRC42-202ENST00000371368 TMEM258P61165 79 aa5.78□□□□□ -1.48
LRRC42-202ENST00000371368 KRTAP4-6Q9BYQ5 205 aa5.75□□□□□ -1.49
LRRC42-202ENST00000371368 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
LRRC42-202ENST00000371368 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
LRRC42-202ENST00000371368 AHNAK2Q8IVF2 5795 aa5.65□□□□□ -1.5
LRRC42-202ENST00000371368 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
LRRC42-202ENST00000371368 K7ERS5 55 aa5.59□□□□□ -1.51
LRRC42-202ENST00000371368 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
LRRC42-202ENST00000371368 PSPHP1O15172 72 aa5.52□□□□□ -1.53
LRRC42-202ENST00000371368 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
LRRC42-202ENST00000371368 V9GYY9 64 aa5.51□□□□□ -1.53
LRRC42-202ENST00000371368 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
LRRC42-202ENST00000371368 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
LRRC42-202ENST00000371368 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
LRRC42-202ENST00000371368 Q1T7F1 81 aa5.47□□□□□ -1.53
LRRC42-202ENST00000371368 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
LRRC42-202ENST00000371368 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
LRRC42-202ENST00000371368 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
LRRC42-202ENST00000371368 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
LRRC42-202ENST00000371368 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
LRRC42-202ENST00000371368 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
LRRC42-202ENST00000371368 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
LRRC42-202ENST00000371368 A6NED7 52 aa5.32□□□□□ -1.56
LRRC42-202ENST00000371368 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
LRRC42-202ENST00000371368 ROMO1P60602 79 aa5.2□□□□□ -1.58
LRRC42-202ENST00000371368 MT1AP04731 61 aa5.16□□□□□ -1.58
LRRC42-202ENST00000371368 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
LRRC42-202ENST00000371368 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
LRRC42-202ENST00000371368 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
LRRC42-202ENST00000371368 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
LRRC42-202ENST00000371368 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
LRRC42-202ENST00000371368 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
LRRC42-202ENST00000371368 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
LRRC42-202ENST00000371368 H3BS24 57 aa4.89□□□□□ -1.63
LRRC42-202ENST00000371368 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
LRRC42-202ENST00000371368 PCP4P48539 62 aa4.86□□□□□ -1.63
LRRC42-202ENST00000371368 MT3P25713 68 aa4.74□□□□□ -1.65
LRRC42-202ENST00000371368 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
LRRC42-202ENST00000371368 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
LRRC42-202ENST00000371368 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
LRRC42-202ENST00000371368 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
LRRC42-202ENST00000371368 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
LRRC42-202ENST00000371368 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.67
LRRC42-202ENST00000371368 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
LRRC42-202ENST00000371368 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
LRRC42-202ENST00000371368 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
LRRC42-202ENST00000371368 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
LRRC42-202ENST00000371368 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
LRRC42-202ENST00000371368 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
LRRC42-202ENST00000371368 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
LRRC42-202ENST00000371368 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
LRRC42-202ENST00000371368 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
LRRC42-202ENST00000371368 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
LRRC42-202ENST00000371368 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
LRRC42-202ENST00000371368 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
LRRC42-202ENST00000371368 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
LRRC42-202ENST00000371368 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
LRRC42-202ENST00000371368 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
LRRC42-202ENST00000371368 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
LRRC42-202ENST00000371368 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
LRRC42-202ENST00000371368 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
LRRC42-202ENST00000371368 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
LRRC42-202ENST00000371368 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
LRRC42-202ENST00000371368 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
LRRC42-202ENST00000371368 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
LRRC42-202ENST00000371368 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
LRRC42-202ENST00000371368 PRM1P04553 51 aa2.64□□□□□ -1.99
LRRC42-202ENST00000371368 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
LRRC42-202ENST00000371368 INE1O15225 51 aa2.06□□□□□ -2.08
LRRC42-202ENST00000371368 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 32.2 ms