RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
SMARCA1-203ENST00000371123 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.91
SMARCA1-203ENST00000371123 LCE2BO14633 110 aa3.12□□□□□ -1.91
SMARCA1-203ENST00000371123 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
SMARCA1-203ENST00000371123 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
SMARCA1-203ENST00000371123 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
SMARCA1-203ENST00000371123 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
SMARCA1-203ENST00000371123 MT1GP13640 62 aa3.02□□□□□ -1.93
SMARCA1-203ENST00000371123 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
SMARCA1-203ENST00000371123 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
SMARCA1-203ENST00000371123 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
SMARCA1-203ENST00000371123 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
SMARCA1-203ENST00000371123 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.94
SMARCA1-203ENST00000371123 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
SMARCA1-203ENST00000371123 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
SMARCA1-203ENST00000371123 MT1LQ93083 61 aa2.84□□□□□ -1.95
SMARCA1-203ENST00000371123 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.83□□□□□ -1.96
SMARCA1-203ENST00000371123 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
SMARCA1-203ENST00000371123 MT1EP04732 61 aa2.78□□□□□ -1.96
SMARCA1-203ENST00000371123 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
SMARCA1-203ENST00000371123 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
SMARCA1-203ENST00000371123 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.97
SMARCA1-203ENST00000371123 KRTAP9-7A8MTY7 169 aa2.71□□□□□ -1.98
SMARCA1-203ENST00000371123 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
SMARCA1-203ENST00000371123 MT1MQ8N339 61 aa2.64□□□□□ -1.99
SMARCA1-203ENST00000371123 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
SMARCA1-203ENST00000371123 SPRR2EP22531 72 aa2.61□□□□□ -1.99
SMARCA1-203ENST00000371123 SPRR2BP35325 72 aa2.61□□□□□ -1.99
SMARCA1-203ENST00000371123 SPRR2AP35326 72 aa2.61□□□□□ -1.99
SMARCA1-203ENST00000371123 NEBP20929 6669 aa2.6□□□□□ -1.99
SMARCA1-203ENST00000371123 PRM1P04553 51 aa2.58□□□□□ -2
SMARCA1-203ENST00000371123 LCE1AQ5T7P2 110 aa2.58□□□□□ -2
SMARCA1-203ENST00000371123 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
SMARCA1-203ENST00000371123 KRTAP19-4Q3LI73 84 aa2.54□□□□□ -2
SMARCA1-203ENST00000371123 LCE5AQ5TCM9 118 aa2.52□□□□□ -2.01
SMARCA1-203ENST00000371123 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
SMARCA1-203ENST00000371123 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
SMARCA1-203ENST00000371123 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
SMARCA1-203ENST00000371123 MT1AP04731 61 aa2.46□□□□□ -2.02
SMARCA1-203ENST00000371123 SPRR2DP22532 72 aa2.46□□□□□ -2.02
SMARCA1-203ENST00000371123 MT4P47944 62 aa2.44□□□□□ -2.02
SMARCA1-203ENST00000371123 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
SMARCA1-203ENST00000371123 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
SMARCA1-203ENST00000371123 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
SMARCA1-203ENST00000371123 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
SMARCA1-203ENST00000371123 LCE1DQ5T752 114 aa2.31□□□□□ -2.04
SMARCA1-203ENST00000371123 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
SMARCA1-203ENST00000371123 LCE4AQ5TA78 99 aa2.24□□□□□ -2.05
SMARCA1-203ENST00000371123 MT3P25713 68 aa2.23□□□□□ -2.05
SMARCA1-203ENST00000371123 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SMARCA1-203ENST00000371123 KRTAP9-4Q9BYQ2 154 aa2.15□□□□□ -2.07
SMARCA1-203ENST00000371123 KRTAP4-6Q9BYQ5 205 aa2.14□□□□□ -2.07
SMARCA1-203ENST00000371123 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
SMARCA1-203ENST00000371123 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
SMARCA1-203ENST00000371123 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
SMARCA1-203ENST00000371123 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
SMARCA1-203ENST00000371123 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
SMARCA1-203ENST00000371123 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
SMARCA1-203ENST00000371123 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
SMARCA1-203ENST00000371123 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
SMARCA1-203ENST00000371123 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
SMARCA1-203ENST00000371123 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
SMARCA1-203ENST00000371123 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
SMARCA1-203ENST00000371123 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
SMARCA1-203ENST00000371123 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.12
SMARCA1-203ENST00000371123 KRTAP5-8O75690 187 aa1.84□□□□□ -2.12
SMARCA1-203ENST00000371123 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
SMARCA1-203ENST00000371123 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
SMARCA1-203ENST00000371123 KRTAP9-9Q9BYP9 154 aa1.79□□□□□ -2.12
SMARCA1-203ENST00000371123 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
SMARCA1-203ENST00000371123 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
SMARCA1-203ENST00000371123 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
SMARCA1-203ENST00000371123 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
SMARCA1-203ENST00000371123 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
SMARCA1-203ENST00000371123 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
SMARCA1-203ENST00000371123 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
SMARCA1-203ENST00000371123 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms