RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 LCE2AQ5TA79 106 aaPredicted RBP3.33□□□□□ -1.88
LRRC40-201ENST00000370952 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
LRRC40-201ENST00000370952 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
LRRC40-201ENST00000370952 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
LRRC40-201ENST00000370952 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
LRRC40-201ENST00000370952 MT1LQ93083 61 aa3.24□□□□□ -1.89
LRRC40-201ENST00000370952 MT1EP04732 61 aa3.19□□□□□ -1.9
LRRC40-201ENST00000370952 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
LRRC40-201ENST00000370952 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
LRRC40-201ENST00000370952 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
LRRC40-201ENST00000370952 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
LRRC40-201ENST00000370952 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
LRRC40-201ENST00000370952 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
LRRC40-201ENST00000370952 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
LRRC40-201ENST00000370952 MT1GP13640 62 aa3.11□□□□□ -1.91
LRRC40-201ENST00000370952 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
LRRC40-201ENST00000370952 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
LRRC40-201ENST00000370952 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
LRRC40-201ENST00000370952 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
LRRC40-201ENST00000370952 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
LRRC40-201ENST00000370952 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
LRRC40-201ENST00000370952 MT1MQ8N339 61 aa2.98□□□□□ -1.93
LRRC40-201ENST00000370952 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
LRRC40-201ENST00000370952 KRTAP19-6Q3LI70 58 aa2.93□□□□□ -1.94
LRRC40-201ENST00000370952 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
LRRC40-201ENST00000370952 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
LRRC40-201ENST00000370952 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
LRRC40-201ENST00000370952 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.96
LRRC40-201ENST00000370952 PRM1P04553 51 aa2.81□□□□□ -1.96
LRRC40-201ENST00000370952 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
LRRC40-201ENST00000370952 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
LRRC40-201ENST00000370952 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
LRRC40-201ENST00000370952 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
LRRC40-201ENST00000370952 LCE5AQ5TCM9 118 aa2.78□□□□□ -1.96
LRRC40-201ENST00000370952 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
LRRC40-201ENST00000370952 MT1AP04731 61 aa2.77□□□□□ -1.97
LRRC40-201ENST00000370952 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
LRRC40-201ENST00000370952 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
LRRC40-201ENST00000370952 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
LRRC40-201ENST00000370952 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
LRRC40-201ENST00000370952 KRTAP6-3Q3LI67 103 aa2.57□□□□□ -2
LRRC40-201ENST00000370952 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
LRRC40-201ENST00000370952 KRTAP5-9P26371 169 aa2.55□□□□□ -2
LRRC40-201ENST00000370952 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
LRRC40-201ENST00000370952 LCE1AQ5T7P2 110 aa2.53□□□□□ -2
LRRC40-201ENST00000370952 SPRR2EP22531 72 aa2.49□□□□□ -2.01
LRRC40-201ENST00000370952 SPRR2BP35325 72 aa2.49□□□□□ -2.01
LRRC40-201ENST00000370952 SPRR2AP35326 72 aa2.49□□□□□ -2.01
LRRC40-201ENST00000370952 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
LRRC40-201ENST00000370952 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
LRRC40-201ENST00000370952 NEBP20929 6669 aa2.41□□□□□ -2.02
LRRC40-201ENST00000370952 MT3P25713 68 aa2.39□□□□□ -2.03
LRRC40-201ENST00000370952 SPRR2DP22532 72 aa2.39□□□□□ -2.03
LRRC40-201ENST00000370952 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
LRRC40-201ENST00000370952 LCE4AQ5TA78 99 aa2.26□□□□□ -2.05
LRRC40-201ENST00000370952 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
LRRC40-201ENST00000370952 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
LRRC40-201ENST00000370952 MT4P47944 62 aa2.14□□□□□ -2.07
LRRC40-201ENST00000370952 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
LRRC40-201ENST00000370952 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
LRRC40-201ENST00000370952 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
LRRC40-201ENST00000370952 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
LRRC40-201ENST00000370952 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
LRRC40-201ENST00000370952 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
LRRC40-201ENST00000370952 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
LRRC40-201ENST00000370952 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
LRRC40-201ENST00000370952 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
LRRC40-201ENST00000370952 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
LRRC40-201ENST00000370952 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
LRRC40-201ENST00000370952 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
LRRC40-201ENST00000370952 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
LRRC40-201ENST00000370952 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
LRRC40-201ENST00000370952 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
LRRC40-201ENST00000370952 LCE1FQ5T754 118 aa1.7□□□□□ -2.14
LRRC40-201ENST00000370952 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
LRRC40-201ENST00000370952 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
LRRC40-201ENST00000370952 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms