RNA–Protein interactions for RNA: ENST00000370888.5

LRRC1-202, Transcript of leucine rich repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-202ENST00000370888 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
LRRC1-202ENST00000370888 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
LRRC1-202ENST00000370888 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
LRRC1-202ENST00000370888 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
LRRC1-202ENST00000370888 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.38
LRRC1-202ENST00000370888 MT1GP13640 62 aa6.4□□□□□ -1.39
LRRC1-202ENST00000370888 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
LRRC1-202ENST00000370888 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.39
LRRC1-202ENST00000370888 MT1MQ8N339 61 aa6.24□□□□□ -1.41
LRRC1-202ENST00000370888 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.41
LRRC1-202ENST00000370888 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.43
LRRC1-202ENST00000370888 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
LRRC1-202ENST00000370888 KRTAP12-4P60329 112 aa6□□□□□ -1.45
LRRC1-202ENST00000370888 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
LRRC1-202ENST00000370888 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
LRRC1-202ENST00000370888 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.45
LRRC1-202ENST00000370888 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
LRRC1-202ENST00000370888 MDN1Q9NU22 5596 aa5.93□□□□□ -1.46
LRRC1-202ENST00000370888 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
LRRC1-202ENST00000370888 KRTAP6-1Q3LI64 71 aa5.74□□□□□ -1.49
LRRC1-202ENST00000370888 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
LRRC1-202ENST00000370888 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
LRRC1-202ENST00000370888 MT1AP04731 61 aa5.55□□□□□ -1.52
LRRC1-202ENST00000370888 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
LRRC1-202ENST00000370888 LCE3DQ9BYE3 92 aa5.54□□□□□ -1.52
LRRC1-202ENST00000370888 SPRR2EP22531 72 aa5.46□□□□□ -1.54
LRRC1-202ENST00000370888 SPRR2BP35325 72 aa5.46□□□□□ -1.54
LRRC1-202ENST00000370888 SPRR2AP35326 72 aa5.46□□□□□ -1.54
LRRC1-202ENST00000370888 LCE3EQ5T5B0 92 aa5.45□□□□□ -1.54
LRRC1-202ENST00000370888 KRTAP9-7A8MTY7 169 aa5.44□□□□□ -1.54
LRRC1-202ENST00000370888 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
LRRC1-202ENST00000370888 KRTAP5-9P26371 169 aa5.37□□□□□ -1.55
LRRC1-202ENST00000370888 PRM1P04553 51 aa5.33□□□□□ -1.56
LRRC1-202ENST00000370888 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
LRRC1-202ENST00000370888 SPRR2DP22532 72 aa5.2□□□□□ -1.58
LRRC1-202ENST00000370888 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
LRRC1-202ENST00000370888 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
LRRC1-202ENST00000370888 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
LRRC1-202ENST00000370888 MT3P25713 68 aa5.01□□□□□ -1.61
LRRC1-202ENST00000370888 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.62
LRRC1-202ENST00000370888 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
LRRC1-202ENST00000370888 MT4P47944 62 aa4.71□□□□□ -1.65
LRRC1-202ENST00000370888 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
LRRC1-202ENST00000370888 NEBP20929 6669 aa4.64□□□□□ -1.67
LRRC1-202ENST00000370888 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
LRRC1-202ENST00000370888 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
LRRC1-202ENST00000370888 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
LRRC1-202ENST00000370888 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
LRRC1-202ENST00000370888 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
LRRC1-202ENST00000370888 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
LRRC1-202ENST00000370888 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
LRRC1-202ENST00000370888 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
LRRC1-202ENST00000370888 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
LRRC1-202ENST00000370888 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
LRRC1-202ENST00000370888 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.75
LRRC1-202ENST00000370888 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
LRRC1-202ENST00000370888 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
LRRC1-202ENST00000370888 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
LRRC1-202ENST00000370888 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
LRRC1-202ENST00000370888 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
LRRC1-202ENST00000370888 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
LRRC1-202ENST00000370888 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
LRRC1-202ENST00000370888 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
LRRC1-202ENST00000370888 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
LRRC1-202ENST00000370888 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
LRRC1-202ENST00000370888 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
LRRC1-202ENST00000370888 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
LRRC1-202ENST00000370888 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
LRRC1-202ENST00000370888 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
LRRC1-202ENST00000370888 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
LRRC1-202ENST00000370888 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
LRRC1-202ENST00000370888 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
LRRC1-202ENST00000370888 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
LRRC1-202ENST00000370888 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
LRRC1-202ENST00000370888 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
LRRC1-202ENST00000370888 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
LRRC1-202ENST00000370888 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 268.5 ms