RNA–Protein interactions for RNA: ENST00000370275.8

ARFGAP1-202, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARFGAP1, Length 3,467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-202ENST00000370275 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
ARFGAP1-202ENST00000370275 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
ARFGAP1-202ENST00000370275 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
ARFGAP1-202ENST00000370275 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
ARFGAP1-202ENST00000370275 MT1GP13640 62 aa4.78□□□□□ -1.64
ARFGAP1-202ENST00000370275 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
ARFGAP1-202ENST00000370275 LCE2DQ5TA82 110 aaPredicted RBP4.74□□□□□ -1.65
ARFGAP1-202ENST00000370275 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
ARFGAP1-202ENST00000370275 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.66
ARFGAP1-202ENST00000370275 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
ARFGAP1-202ENST00000370275 MT1MQ8N339 61 aa4.65□□□□□ -1.67
ARFGAP1-202ENST00000370275 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
ARFGAP1-202ENST00000370275 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
ARFGAP1-202ENST00000370275 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
ARFGAP1-202ENST00000370275 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
ARFGAP1-202ENST00000370275 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
ARFGAP1-202ENST00000370275 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
ARFGAP1-202ENST00000370275 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
ARFGAP1-202ENST00000370275 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
ARFGAP1-202ENST00000370275 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
ARFGAP1-202ENST00000370275 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
ARFGAP1-202ENST00000370275 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
ARFGAP1-202ENST00000370275 MT1AP04731 61 aa4.13□□□□□ -1.75
ARFGAP1-202ENST00000370275 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
ARFGAP1-202ENST00000370275 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
ARFGAP1-202ENST00000370275 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
ARFGAP1-202ENST00000370275 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
ARFGAP1-202ENST00000370275 SPRR2EP22531 72 aa4.04□□□□□ -1.76
ARFGAP1-202ENST00000370275 SPRR2BP35325 72 aa4.04□□□□□ -1.76
ARFGAP1-202ENST00000370275 SPRR2AP35326 72 aa4.04□□□□□ -1.76
ARFGAP1-202ENST00000370275 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
ARFGAP1-202ENST00000370275 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
ARFGAP1-202ENST00000370275 PRM1P04553 51 aa4□□□□□ -1.77
ARFGAP1-202ENST00000370275 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
ARFGAP1-202ENST00000370275 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
ARFGAP1-202ENST00000370275 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
ARFGAP1-202ENST00000370275 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
ARFGAP1-202ENST00000370275 SPRR2DP22532 72 aa3.85□□□□□ -1.79
ARFGAP1-202ENST00000370275 MT3P25713 68 aa3.71□□□□□ -1.82
ARFGAP1-202ENST00000370275 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.83
ARFGAP1-202ENST00000370275 NEBP20929 6669 aa3.65□□□□□ -1.83
ARFGAP1-202ENST00000370275 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
ARFGAP1-202ENST00000370275 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
ARFGAP1-202ENST00000370275 MT4P47944 62 aa3.51□□□□□ -1.85
ARFGAP1-202ENST00000370275 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.85
ARFGAP1-202ENST00000370275 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
ARFGAP1-202ENST00000370275 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.88
ARFGAP1-202ENST00000370275 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
ARFGAP1-202ENST00000370275 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
ARFGAP1-202ENST00000370275 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
ARFGAP1-202ENST00000370275 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
ARFGAP1-202ENST00000370275 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
ARFGAP1-202ENST00000370275 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
ARFGAP1-202ENST00000370275 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
ARFGAP1-202ENST00000370275 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
ARFGAP1-202ENST00000370275 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
ARFGAP1-202ENST00000370275 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
ARFGAP1-202ENST00000370275 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
ARFGAP1-202ENST00000370275 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
ARFGAP1-202ENST00000370275 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
ARFGAP1-202ENST00000370275 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
ARFGAP1-202ENST00000370275 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
ARFGAP1-202ENST00000370275 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
ARFGAP1-202ENST00000370275 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
ARFGAP1-202ENST00000370275 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
ARFGAP1-202ENST00000370275 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
ARFGAP1-202ENST00000370275 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
ARFGAP1-202ENST00000370275 KRTAP5-8O75690 187 aa2.58□□□□□ -2
ARFGAP1-202ENST00000370275 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
ARFGAP1-202ENST00000370275 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
ARFGAP1-202ENST00000370275 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
ARFGAP1-202ENST00000370275 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
ARFGAP1-202ENST00000370275 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
ARFGAP1-202ENST00000370275 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
ARFGAP1-202ENST00000370275 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
ARFGAP1-202ENST00000370275 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
ARFGAP1-202ENST00000370275 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms