RNA–Protein interactions for RNA: ENST00000369130.7

VPS45-202, Transcript of vacuolar protein sorting 45 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS45, Length 2,790 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-202ENST00000369130 INE1O15225 51 aa3.55□□□□□ -1.84
VPS45-202ENST00000369130 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
VPS45-202ENST00000369130 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
VPS45-202ENST00000369130 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
VPS45-202ENST00000369130 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
VPS45-202ENST00000369130 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
VPS45-202ENST00000369130 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
VPS45-202ENST00000369130 KRTAP5-3Q6L8H2 238 aa3.46□□□□□ -1.86
VPS45-202ENST00000369130 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
VPS45-202ENST00000369130 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
VPS45-202ENST00000369130 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
VPS45-202ENST00000369130 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
VPS45-202ENST00000369130 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
VPS45-202ENST00000369130 MT1LQ93083 61 aa3.34□□□□□ -1.87
VPS45-202ENST00000369130 MT1EP04732 61 aa3.31□□□□□ -1.88
VPS45-202ENST00000369130 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
VPS45-202ENST00000369130 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
VPS45-202ENST00000369130 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
VPS45-202ENST00000369130 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
VPS45-202ENST00000369130 MT1GP13640 62 aa3.28□□□□□ -1.88
VPS45-202ENST00000369130 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
VPS45-202ENST00000369130 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
VPS45-202ENST00000369130 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
VPS45-202ENST00000369130 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
VPS45-202ENST00000369130 MT1MQ8N339 61 aa3.11□□□□□ -1.91
VPS45-202ENST00000369130 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
VPS45-202ENST00000369130 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
VPS45-202ENST00000369130 KRTAP19-6Q3LI70 58 aa3.08□□□□□ -1.92
VPS45-202ENST00000369130 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
VPS45-202ENST00000369130 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
VPS45-202ENST00000369130 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
VPS45-202ENST00000369130 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
VPS45-202ENST00000369130 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
VPS45-202ENST00000369130 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
VPS45-202ENST00000369130 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
VPS45-202ENST00000369130 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
VPS45-202ENST00000369130 PRM1P04553 51 aa2.78□□□□□ -1.97
VPS45-202ENST00000369130 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
VPS45-202ENST00000369130 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
VPS45-202ENST00000369130 MT1AP04731 61 aa2.72□□□□□ -1.97
VPS45-202ENST00000369130 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
VPS45-202ENST00000369130 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
VPS45-202ENST00000369130 SPRR2EP22531 72 aa2.7□□□□□ -1.98
VPS45-202ENST00000369130 SPRR2BP35325 72 aa2.7□□□□□ -1.98
VPS45-202ENST00000369130 SPRR2AP35326 72 aa2.7□□□□□ -1.98
VPS45-202ENST00000369130 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
VPS45-202ENST00000369130 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
VPS45-202ENST00000369130 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
VPS45-202ENST00000369130 LCE1EQ5T753 118 aa2.57□□□□□ -2
VPS45-202ENST00000369130 SPRR2DP22532 72 aa2.55□□□□□ -2
VPS45-202ENST00000369130 KRTAP5-9P26371 169 aa2.55□□□□□ -2
VPS45-202ENST00000369130 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
VPS45-202ENST00000369130 NEBP20929 6669 aa2.49□□□□□ -2.01
VPS45-202ENST00000369130 MT3P25713 68 aa2.45□□□□□ -2.02
VPS45-202ENST00000369130 MT4P47944 62 aa2.41□□□□□ -2.02
VPS45-202ENST00000369130 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
VPS45-202ENST00000369130 KRTAP20-1Q3LI63 56 aa2.33□□□□□ -2.04
VPS45-202ENST00000369130 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
VPS45-202ENST00000369130 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.05
VPS45-202ENST00000369130 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
VPS45-202ENST00000369130 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
VPS45-202ENST00000369130 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
VPS45-202ENST00000369130 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
VPS45-202ENST00000369130 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.08
VPS45-202ENST00000369130 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
VPS45-202ENST00000369130 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
VPS45-202ENST00000369130 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
VPS45-202ENST00000369130 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
VPS45-202ENST00000369130 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
VPS45-202ENST00000369130 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
VPS45-202ENST00000369130 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
VPS45-202ENST00000369130 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
VPS45-202ENST00000369130 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
VPS45-202ENST00000369130 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
VPS45-202ENST00000369130 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
VPS45-202ENST00000369130 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
VPS45-202ENST00000369130 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 65.1 ms